Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01332 ATGGATTTAGAAGGAAGTGAAAGGGATTCTGTGCTAACTACTACTCAAGTGAGCATAGGTGGATTTGACACGAATGTCAAAGCTTATGATCTGGTGTCATTCTTGGAATCTGAGATCGGATATGTAGACAGATGTCGGCTGAAGACTTCTTGCACTCCTCTGGATTCATATCCGGACTTTAATATCAGTGATCTTAAAGAGAAAGAAAAAACAGATGATTATAGAAAGGTGGCACCTCATGCCTTTGTGCATTTTACTTTGGCAGAATCTGCAACCGAGGCCCTCAATGCTGCAGGTCGCTGTGACCTAATTTTGAACGGTTGCCCATTGAAGGTCATCTGTGGGCCACAAAATCCAAACTTCCTGAACAAAAGGAGGCGATCTGCGGCTCCTTTTAAGATGTCGGATGTCATCGTTGAAATTGGGACTTTGGTTAGCCTATCAAATTTTACTGTTGCTTGGAAAGGACCTGCTAAAGGGGTAAACTTTCTAGTGGATCCTTTTGATAGTATGTGCAAGCTTTGTTTCAATCGAGAAGTTGCGTTCAAACCCAAAGGAATGGCTAAAAAGGTAGTGATAAAGTGTGATTTTAAGGTGGGATTTTTGGTTAGAGACATTCTGGAGATTAAAAGATATGATGATACATCGTATCATGTTGTTTTATTACATCTAGCTTCACCACCTTCCGTATGGTACAGAACTGCTGATGATGATATTGAAGAATCAGTTACCATTGATTTGTTGGATGACGATGATCCTTGGATCAGAACCACCGACTTTACTCCTAGCGGGGCCATTGGTCGGTGCAATTTTTATAGAATTTCAATCCCGCCTCGTTATGGTGCAAAGTTGAATAAGGCATTGGAATATCTGAGATGCCAACGAGTGCAACGGGTTCAGTTGACCAAGCCACTTAGGATACAAAATGAACCTGATTTTGGGGTGCCCATGTCCGATGCCTTTTTCTACATAGATTTTCAAACGGACATTTCATTTGATATAATGTTCCTGGTCAATGCAATTGTGCATAGAGGAATATTCAACCAGTACAGTTTATCAAACCAGTTTTTCGAATTGCTGAGACATCAACCTAAGGATGTCAGCGTGGCTGCCTTGAAGCACTTATGTACTTACAAGCGCCCAGTGTTTGATGCCTTTAAGAGGCTGAAAGCAGTCCAAGAATGGTTGCTCAGTAATCCAAAACTTTATCAGATCTCCAAGCCGTGCGATAATGTTATGGAGGTTAGAAGACTGGTTGTTACTCCAACAAAAGCCTATTGCATAGCCCCTGAAGTTGAATTGTCTAATAGGGTCCTCAGAAATTTTAAAGATGTTTCAGACCGATTCTTGAGAGTTACCTTCATGGATGAAGGAATGCAAACACTTAATGTATATGCTCTTAACTACTATGTGGCTCCCATTGTGAAGGAAATCACAGCAAATTCCTTTAAACAGTATACAAGAATATATAAAAGGGTTAGGACAATCTTGGAAGATGGGTTTTACTTTTGTGGCCGAAAATATTCATTTTTGGCTTTTTCTTCGAATCAACTTAGAGATCGTTCTGCATGGTTTTTTGCCGAAGACAGAAACATAAGCTGTGACGATATAAGAAGTTGGATGGGAAGATTTAATCAGAAGAACATTGCAAAGTGTGCGGCTAGAATGGGACAATGCTTCTCATCTACATATGCATCAGTGGACGTTGCTGCGAATCAAGTTAACTCGATGCTACCAGATGTTGAGAGGAATAATTATGTTTTTTCTGATGGCATCGGTATCATCACTACTGATCTTGCAGATGAAGTAGCTGAAAAATTGAAATTGGACAAGGTACCCTCCGCTTACCAGATCAGGTATGCTGGTTTTAAAGGGGTTGTAGCCTGTTGGCCTTCTAAAGGAGACGGAATCAAACTTTCTTTGAGGCCCAGCATGAACAAGTTTCAGTCTACTCATACTACCTTGGAAATCTGTGCCTGGACTCATTTTCAACCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCTCTGGAAGTGCCTGACGAAATATTCTGGAAAATGCAGGAGAGTATGATTTCAAAGTTAAACCAAATGCTCGTTGACCCAGAAGTTGCCTTTGATGTTCTTACTAAGTCTTGTGCAGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGCGGCTTCAGTCCCAAAACAGAACCTCATCTTAGAGGCATGCTAAATTCTATCCGTGCTGCGCAGCTTTGGGGCCTTAGAGAAAAGTCTAGGATTTTTGTTTCATCTGGGAGATGGTTGATGGGTGTTTTAGATGAGTTGGGCGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTTTCTACTCCTTCTCTTGAAAATTGCTTTGCAAAGCATGGCTCAAGATTTTCAGAGACCAACTCCCTACACGTGGTTGAAGGCCTAGTGGTGATAGCCAAAAATCCATGTCTTCACCCTGGAGATGTGAGAGTTTTGGAAGCAGTTGATGTCCCAGATTTACATCATTTATATGACTGTCTTGTTTTCCCTCAAAAGGGCGAAAGACCCCATTCAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATCTGTACTTTGTCACATGGGATGGAAATCTCATTCCACCTAGTAAGAGGAGCTGGACACCTATGGAGTATACTGCTTCAGAAAGCCGGCTTCAAACACGGCATGTCACTATCCAGGACATCATTGAATTTTTTGTCAAAAACATGGTGAATGAGCATTTGGGTTCAATCTGTAATGCACATGTGGTACATGCTGATTCCAGTGACTATGGTGCTTTGGATGAGAAATGCATACACTTGGCTGAGTTAGCAGCCACTGCTGTTGATTTTCCAAAGACTGGCAAGCTTGTCACTATGCCTCCTAATCTGAAACCCAAGCTGTACCCTGATTTTATGGGGAAAGAACACCACCAATCATACAAGTCGAAAAAAATTCTGGGCAGACTTTACCGGCGTATCAAAGACGCTTATGATAAAGATATTGATGCACCTGAAGTGAACTGTGTATCCGGTGATATAAATTATGATACAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGATGATGCATGGGAACAAAAGTGTTCTTATGATGGCCAGTTGGCTGGATTACTCGGTCAGTACAAAGTGAAAACTGAAGAAGAAGTTGTCACTGGACAGATCTGGTCCATGCCTAAATACAACAGCAGGAAGCATGGGGAGCTTAAGGAGAGGCTGAAGCACTCATACAGTGCTCTCAAAAGAGAATTTAGGCAAACCTTTGAGAAACCGAAATCAGATGTTGGAGAATTAAGTGATGAAGAAAAAAATTTGCTGTATGAACAGAAAGCTTCTGCCTGGTATCAGGTGACATATCATCCTAAATGGGTCAAAAAAACCCTTGATTTGCAAATTAAATCCTCAGATGACCAAGAGGCAGATAGTTTGAAGAATGTGATGTTGAGTTTTCCTTGGATTGCTGTTGATTACCTAGCTCGCACAAAGATAAGGAATCGGAAAGTTGGAAATTTGGAGTCAACCAAGCCAGTTGATTCACTGGCGAAATATCTATCTGAAAGGTTATAG 3609 0.4123 MDLEGSERDSVLTTTQVSIGGFDTNVKAYDLVSFLESEIGYVDRCRLKTSCTPLDSYPDFNISDLKEKEKTDDYRKVAPHAFVHFTLAESATEALNAAGRCDLILNGCPLKVICGPQNPNFLNKRRRSAAPFKMSDVIVEIGTLVSLSNFTVAWKGPAKGVNFLVDPFDSMCKLCFNREVAFKPKGMAKKVVIKCDFKVGFLVRDILEIKRYDDTSYHVVLLHLASPPSVWYRTADDDIEESVTIDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRYGAKLNKALEYLRCQRVQRVQLTKPLRIQNEPDFGVPMSDAFFYIDFQTDISFDIMFLVNAIVHRGIFNQYSLSNQFFELLRHQPKDVSVAALKHLCTYKRPVFDAFKRLKAVQEWLLSNPKLYQISKPCDNVMEVRRLVVTPTKAYCIAPEVELSNRVLRNFKDVSDRFLRVTFMDEGMQTLNVYALNYYVAPIVKEITANSFKQYTRIYKRVRTILEDGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDRNISCDDIRSWMGRFNQKNIAKCAARMGQCFSSTYASVDVAANQVNSMLPDVERNNYVFSDGIGIITTDLADEVAEKLKLDKVPSAYQIRYAGFKGVVACWPSKGDGIKLSLRPSMNKFQSTHTTLEICAWTHFQPGFLNRQIITLLSALEVPDEIFWKMQESMISKLNQMLVDPEVAFDVLTKSCAEHGNAAAIMLSCGFSPKTEPHLRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFSETNSLHVVEGLVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGERPHSNEASGSDLDGDLYFVTWDGNLIPPSKRSWTPMEYTASESRLQTRHVTIQDIIEFFVKNMVNEHLGSICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPNLKPKLYPDFMGKEHHQSYKSKKILGRLYRRIKDAYDKDIDAPEVNCVSGDINYDTDLEVPGSADFIDDAWEQKCSYDGQLAGLLGQYKVKTEEEVVTGQIWSMPKYNSRKHGELKERLKHSYSALKREFRQTFEKPKSDVGELSDEEKNLLYEQKASAWYQVTYHPKWVKKTLDLQIKSSDDQEADSLKNVMLSFPWIAVDYLARTKIRNRKVGNLESTKPVDSLAKYLSERL 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01332 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 14 1199 IPR007855 GO:0003968
Vivi3g01332 1202 Pfam RNA dependent RNA polymerase 420 1000 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01332 Vivi-Chr3 21732883 21738168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01332 K11699 - gmx:100795178 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01332 3 21732883 21738168 Vivi3g01332 3 21732883 21738168 ECH