Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01324 ATGACGAAGCTATTTACCCTTGTAATAATTTCAAGCATATTGTTCAAACAAGTGACCTTAATTCTTGCAGATGTTGGTACTGCTGCTTCTTATGGACCTCCATATATACCTACTTCTTGTGATGGAAGTAGGAGAGAGCAGTTTCCACCAGGTAACATATTTGTGGCAGTGAATGAAGGGTTATGGGATAATGGTGCAGCATGTGGAAGAAGATATAGAGTGAGATGTGTGAGTGGAATCAACAAGCCATGCAAAGGTGGTAGTATTGATGTTAAAGTTGTTGATTCTATTACTTCTTGTACAAAGTCTTCATGCCCCCACACTTTTCACATGTCAACTGAAGCTTTTTCAGCAATCTCACGTTTTCAAAATGCGAATATCAATATTGAATATATTCAGATATGA 405 0.3753 MTKLFTLVIISSILFKQVTLILADVGTAASYGPPYIPTSCDGSRREQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGINKPCKGGSIDVKVVDSITSCTKSSCPHTFHMSTEAFSAISRFQNANINIEYIQI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01324 134 CDD DPBB_EG45-like 24 131 - -
Vivi3g01324 134 Gene3D - 24 134 IPR036908 -
Vivi3g01324 134 Pfam Lytic transglycolase 56 131 IPR009009 -
Vivi3g01324 134 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 134 IPR007112 -
Vivi3g01324 134 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 3 133 - -
Vivi3g01324 134 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01324 Vivi-Chr3 21635209 21636144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01324 - - gmx:100792215 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01324 3 21635209 21636144 Vivi3g01324 3 21635209 21636144 ECH