Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01311 ATGAGTCACAGGAACTTCTCAGCTAGTTCTGGTAGTGGAAATGGTGGCAGGACATTTGAGTTTGGAAGGACTCATGTGGTTAGACCTAAAGGCAAGCACCAGGCAACTATAGTTTGGCTACATGGTATTGGCGATAACGGCTCAAGCTGGTCTCAACTATTGGAAACTCTTCCTCTTCCAAATATTAAATGGATTTGTCCAACTGCTCCTACGCGGCCTGTAGCCTTATTTGGCGGATTTCCTTGCACTGCATGGTCTGATGTTGGGGATATTTCCGAAGACGCTTCGAATGATTTGGAGGGGTTAGATGCTTCTGCAGCACATGTTGCCAATCTTTTGTCAACAGAGCCTGCAAATATCAAACTTGGTATTGGAGGCTTCAGTAATGGTGCTGCAACTGCACTTCACTCGGCTACATGTCATGTTTTGGGACACTATGGGAATGGAAATGTTTATCGTATCAATTTGAGTGCGATTGTTTCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGGAAAACAAGATCCGTGGATCGCGTGATGGCATAAGACGTGCGGCGTCGTTGCCGCTATTTCTCGGCCATGGGAAGGCTGACGACGTGGTTGCATATGAACACGGAGAGACTTCTGCAAGGACCTTAAGCTCAGCCGGATTCCAGAATCTTATATTTAGAAGCTACAACGGGTTGGGTCATTATACAGTTCCTGAAGAGACTGATGAAGTATGCAGATGGCTAACTGCAAATTTGGCACTTGAGGGGTTAAGATTGAACTAG 777 0.4595 MSHRNFSASSGSGNGGRTFEFGRTHVVRPKGKHQATIVWLHGIGDNGSSWSQLLETLPLPNIKWICPTAPTRPVALFGGFPCTAWSDVGDISEDASNDLEGLDASAAHVANLLSTEPANIKLGIGGFSNGAATALHSATCHVLGHYGNGNVYRINLSAIVSLSGWLPCSRTLENKIRGSRDGIRRAASLPLFLGHGKADDVVAYEHGETSARTLSSAGFQNLIFRSYNGLGHYTVPEETDEVCRWLTANLALEGLRLN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01311 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Vivi3g01311 258 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Vivi3g01311 258 MobiDBLite consensus disorder prediction 1 20 - -
Vivi3g01311 258 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Vivi3g01311 258 MobiDBLite consensus disorder prediction 1 17 - -
Vivi3g01311 258 SUPERFAMILY alpha/beta-Hydrolases 25 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01311 Vivi-Chr3 21433928 21438029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01311 8 254 Acyl Lipid Metabolism Gene Families AT5G20060 67.871 7.10e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01311 K06130 - gmx:100811642 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01311 3 21433928 21438029 Vivi3g01311 3 21433928 21438029 ECH