Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01286 ATGTCTTCCTTCCAGCACCTAATCATCATCCTCTTCTCATCATTGTTCATCCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCATTACGGCCCTCCCTTTATACCGACAGAGTGTTTCGGGGGAGGTGCGTCGCAATTTCCGGCGACCAACATGTTTGGTTCTGCTGGAGAAGGTATATGGGACAATGGTGCAGCATGTGGGAGGCTCTATGAGGTGAGATGTATCAGTGCGGCTGTTCCAAGAACTTGCATTCCTGGTCAAACAGTTCAGATTAAGATTGTTGACAGAGCACAATCCTCTGTTTCTAGGCCCTCAACTGACGATACTTCCATGGTTCTTTCCACCACTGCTTTTCAAGTCATTGCAAATGTTTCCTCATCATTAATTAACATTGAGTTCCAACAGGTTTGA 414 0.4638 MSSFQHLIIILFSSLFIHFSQADVGTASHYGPPFIPTECFGGGASQFPATNMFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTVQIKIVDRAQSSVSRPSTDDTSMVLSTTAFQVIANVSSSLINIEFQQV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01286 137 CDD DPBB_EG45-like 23 135 - -
Vivi3g01286 137 SUPERFAMILY Barwin-like endoglucanases 12 137 IPR036908 -
Vivi3g01286 137 Pfam Lytic transglycolase 60 133 IPR009009 -
Vivi3g01286 137 Gene3D - 20 137 IPR036908 -
Vivi3g01286 137 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 6 136 - -
Vivi3g01286 137 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 137 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01286 Vivi-Chr3 21280092 21283920 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01286 - - gmx:100803494 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01286 3 21280092 21283920 Vivi3g01286 3 21280092 21283920 ECH