Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01270 ATGGATACTGAGAGTGGAGTCCCAATTTTAGATTTTCGTAAGAGCACTGGAATTACATTAGAAGAAGGAGGTCAAGGATGGAAAGAAATGATTAAGAAAGTGAGAGAAGCATTTGAGAGTCATAGTATGTTTCTCTTAAGATGTGATGAAATACCGAAAGAATTACAAAATGAAATGTTCGCAAACATTAAATCTTTGTTTGATCTACCTGAGGAGACAAAGACGCAGTTCACTGGAAAAAGAGTTTATAGGGGCTATACGTCCAAGAGCGTTGCCCTTCCTAATAGTCAAACATTCGGTATTGATGATACTTTTGATCCAAATGAGACTCGAAGTTTCACTAAGCTCATGTGGCCTGAAGGAAATCCAAATTTCCGTGAGGCACTACTTTCATTTAGCTCAGAAGCACGAAAAATAAGCTCATTTATCCTAAAGATGGTTGTGGAGGGCTTTGGCCTTCCAGAAAATTACATTTCAGAAGTTGAAGAGTTGTGTAGAGGTAATGATACACGGCTAACAAAATATCCACTCCCTAAAGAAACAACTGATTCTGCTATTACTTTTGTGCCTCACACTGACAAATTCAATCTTACCTTCATAAGTGAGAACGAAGTCCAAGGTCTACAACTTCTACAGAAATCAGGCAATTGGGTTAACGTAAATGTTCCTTCAAATGGTTTTGTTGTAATGGTTGGTGAAATGTTGCAGGTATGGAGTAATGGCAGATTTAAAGCACCAATACATAGAGTGGCGATAAGAGGAAACAAAGACAGATATGTATTTATTCTTTTTTCACTTCCAAAGGAAGAAACATTCATTAAGGTACCCCCTGAGTTAGTAGATGAGGATCATCCTCTCCGTTACAAGACATTCATGTATGAAGATTTCATCAATTTTATTAAAACTGTTGGTACTAAATTGGGAGCATTTGAAGATTTTGCTGGAATTTAA 951 0.3691 MDTESGVPILDFRKSTGITLEEGGQGWKEMIKKVREAFESHSMFLLRCDEIPKELQNEMFANIKSLFDLPEETKTQFTGKRVYRGYTSKSVALPNSQTFGIDDTFDPNETRSFTKLMWPEGNPNFREALLSFSSEARKISSFILKMVVEGFGLPENYISEVEELCRGNDTRLTKYPLPKETTDSAITFVPHTDKFNLTFISENEVQGLQLLQKSGNWVNVNVPSNGFVVMVGEMLQVWSNGRFKAPIHRVAIRGNKDRYVFILFSLPKEETFIKVPPELVDEDHPLRYKTFMYEDFINFIKTVGTKLGAFEDFAGI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01270 316 Pfam 2OG-Fe(II) oxygenase superfamily 173 264 IPR044861 -
Vivi3g01270 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 5 313 - -
Vivi3g01270 316 SUPERFAMILY Clavaminate synthase-like 5 300 - -
Vivi3g01270 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 296 - -
Vivi3g01270 316 Gene3D - 1 302 IPR027443 -
Vivi3g01270 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 92 IPR026992 -
Vivi3g01270 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 267 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01270 Vivi-Chr3 21124602 21125744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01270 126 289 Glycosyltransferase AT5G59530 25.749 1.41e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01270 - - vvo:131656517 380.948