Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01247 ATGGTTTTACACTCTCTATGCCTCTCTCCCTGTCCTTCCAACAACAACCTTATTCTTCCCAACAACAACAACCTTATCTTCAGGAACAACAACAACAACAATAACACTTCTAAGGTAGTAATCCTTAACCAAAACAAATCCGACCAAAAAAGAGACTTTTCAACTTCTTCTCTAAAACCCACTTCACAAACCAGAAGAGATTTGATGCTGTTAGGCCTCACTTCACTATCTCTAACATGCCTTCCATTGTCTGCAACTCATGCTGGAGAAGAAGAAGACCCCAAAATGGCTTCCTTTACAGATGAAGTCAATGCCTATTCTTATCTTTACCCTGTTGAGCTTCCTTCTAAAAAATTTGTCTTCAAATGGGTAGAATCCCGAAAGCCAGAACGATATTCATCAGCCGCACCACTTTCTCCTAATGCACGGCTGCGAATTGTGTCTGAACGTGTTGATATCTTTGACAACCTCATCATTTCCGTCACGATAGGCCCTCCAAATGCAAGCCTTATAAACTTGAAGGATAAGAGCAAATGGACTGCAAAAGATGTCGCTGATTCAGTTTTAGCTGATAAATCTTCACTGCGAGTTACTTCAACCGAGCGCTCTGCTGAGAGTTCAGTCCTCGACGCACATACCGATGAAATTGATGGTGAACCTTATTGGTACTATGAATACCTTATCCGAAAATCGCCTAATACAATGTCTGAAGAATCAGGAATTTACCGGCATTATCTAGCTTCAACAGCAGAAAGAGATGGTTATCTGTACTCGATCAGCGCTTCAACCCTCAGCCCGCAATGGAAAAAAATGGGGCCATTATTTCAACAGACAGTGAGTTCGTTCCGCCTTGTCAGTCCAACGGAAAATTATGTTCCTCCTTTCAAAGATCCCTGGAGATTTTGGTGA 909 0.4191 MVLHSLCLSPCPSNNNLILPNNNNLIFRNNNNNNNTSKVVILNQNKSDQKRDFSTSSLKPTSQTRRDLMLLGLTSLSLTCLPLSATHAGEEEDPKMASFTDEVNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01247 302 Pfam PsbP 96 283 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vivi3g01247 302 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 84 284 - -
Vivi3g01247 302 PANTHER - 47 284 - -
Vivi3g01247 302 SUPERFAMILY Mog1p/PsbP-like 97 284 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01247 Vivi-Chr3 20874906 20877287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01247 - - vvo:131660551 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01247 3 20874906 20877287 Vivi3g01247 3 20874906 20877287 ECH