Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01142 ATGGGTTTGAGAAACTCCTATGTTCTGTGCATGGCACTTATGTTGTCTTTCTCTTCAATTAACTGTTTTGACATAACAAAAATTCTAGGACAAAACCCAGAATTCTCCACTTTCAACAAATACCTAACGGAAACCAAGTTGGCTGAACAAATCAACGCTGCTAAAGCCGTTACAGTTCTCGCCCTCGATAATACCGATATCGCTCCTCTCGCTGGTAAATCACTCGACGCCATTAAAACCGTTATTGGGACCCACATTGTAACCGATTTCTACGATGAGAAGAAACTCGTTGAAGCCATTGGAAGCCATGCAGAATTGGCTACACTTTCACCGGCTTCCGGCTTAGCCGCTAAGATCTACGTGGCACTTATTAATGAAGGTGAGGTGGCATTTAGTTCCGCTGTTGCGGGTTCAACTTTTGATACTAAGCTTGTTAAAACCGTTACGACCGAAGCTGGAGTCGTATCGGTTCTTCAGGTTACGCAACCTATTGTTAAGGTTGCTGATTCAGCTCCGGCGTTATCAACGCCGGTGCTTGCTTCCGGTGCTGCTGCCAAGGTTGCTTCACCCACCGCGTCTGTTGAGGCACCTAAGAGTCAGGCTGCTGGTGCACCTGCTCCTAGTGCTTCTTCTCGTACCACCTTTGGGTTTATTGGTGTTGTCATGGCTTTTGCTTCCATTTTTGTTTCTTTGTAA 696 0.4598 MGLRNSYVLCMALMLSFSSINCFDITKILGQNPEFSTFNKYLTETKLAEQINAAKAVTVLALDNTDIAPLAGKSLDAIKTVIGTHIVTDFYDEKKLVEAIGSHAELATLSPASGLAAKIYVALINEGEVAFSSAVAGSTFDTKLVKTVTTEAGVVSVLQVTQPIVKVADSAPALSTPVLASGAAAKVASPTASVEAPKSQAAGAPAPSASSRTTFGFIGVVMAFASIFVSL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01142 231 ProSiteProfiles FAS1/BIgH3 domain profile. 22 148 IPR000782 -
Vivi3g01142 231 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 211 IPR033254 -
Vivi3g01142 231 Gene3D FAS1 domain 22 181 IPR036378 -
Vivi3g01142 231 SUPERFAMILY FAS1 domain 28 121 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01142 Vivi-Chr3 19062975 19063886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01142 - - vvo:131655074 407.142