Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01130 ATGGTGATTGTGGAAGGTGAAGAGGAACATGAAGAATTGATTCCAGGTTTACCTGATGAAATAGCAGAGATTTGTCTTCTTCGTGTTCCTTACCCGTATCAGCCTCTAGTACGCTCGGTTTCATCATCGTGGAACCGAGCAATATCGAATCCATCTTTTCTACTCTCCAAGAAAAACTTCTCGAGAAAACTTTCGAATCCGCAACTCTTTGTGTTAGGTTTTCATACAGTAACCTCAAAACTCCAATGGCAATCGCTCGATCCTTCTTCTAACCGTTGGTTTATACTTCCTCAGATGCCTCTCCCGAACGACACCGTTTGCTCAACCTCATTTGCTTCCGCTTCGTTGCAGACTCAGGGAAAGATATTCTTCATGAGAGGAACTTCGACGATTGTTTACCGTACAGTCGTTAACAAATGGTCGACGGCGTCGGGGATGATATCTGAGAAATCTTACTTCGCGGCGGAGGAAGTGAACGGAAGAATCGTAACCGTTGGTAAGAGCGGTACAGAAATCTACGATCCGGAAGATGACACGTGGAGGAGAGGCGCGAAGTTTCCGGGGGAATTGGAGAGGTATGAAACGGTGGTTAACGGAGGGAAGATTTACGTAACGGAAGGTTGGTGGTGGCCGTTTGCGGTTAGGCCGAGAGGTTGGGTTTATGAAATATCGAGTGACACGTGGCGTGAGATGAGTGAGGGGATGAAAGACGGTTGGGCGGGAGAGAGTGTTTCGGTGTGTGGTAAGGTGTTTATGATACCTGACGTTGATTTACCGATGAAGGTTTACGATGAAAATACTGACACGTGGCGGTGTGTGAATGGTGAGAGGTTGCCAAGAGATAAAGTTAAGAAACCGTTTGTTGCGAGAGGATTAGATGATAGAATCTACGTGGCGTCACTTGGTTTGAAAGTGGTGGTTGGTACGGTTGTTGATGATGACGTGTGTGGCTTGATGGTGACGTGGCAGGTTTTGGATGCACCGGAAGGTTTTGGAGAATTCTCACCTTGTAGTTGCCAGGTAGTGTATGCATGA 1035 0.4686 MVIVEGEEEHEELIPGLPDEIAEICLLRVPYPYQPLVRSVSSSWNRAISNPSFLLSKKNFSRKLSNPQLFVLGFHTVTSKLQWQSLDPSSNRWFILPQMPLPNDTVCSTSFASASLQTQGKIFFMRGTSTIVYRTVVNKWSTASGMISEKSYFAAEEVNGRIVTVGKSGTEIYDPEDDTWRRGAKFPGELERYETVVNGGKIYVTEGWWWPFAVRPRGWVYEISSDTWREMSEGMKDGWAGESVSVCGKVFMIPDVDLPMKVYDENTDTWRCVNGERLPRDKVKKPFVARGLDDRIYVASLGLKVVVGTVVDDDVCGLMVTWQVLDAPEGFGEFSPCSCQVVYA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01130 344 CDD F-box_AtAFR-like 13 53 - -
Vivi3g01130 344 SMART fbox_2 17 57 IPR001810 GO:0005515
Vivi3g01130 344 Gene3D - 56 322 IPR015915 GO:0005515
Vivi3g01130 344 SUPERFAMILY Kelch motif 67 299 IPR015915 GO:0005515
Vivi3g01130 344 PANTHER OS02G0202900 PROTEIN 9 339 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01130 Vivi-Chr3 18914767 18917183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01130 - - mtr:11433037 499.204