Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01128 ATGGCTTACACCCTTCCATCTCTTCGTCTCTTCAACCCCTCCGGTTCCGCCTTCTCGAGCACAAAATTTAGTGGCACTTTACACGCGGCCTCTTTCTCGAACCAGACGAGTCGACTCACCTCTCACTCAATGAGTCAACCCGCCGTCACGGATTCCAGCACTCTGTCGACACCTGAAGTTGCTCCGTCACCGCCAGACAACGCCGATGTTGTGGTCCAGTACGTGGTGCTCCGGCGAGACCTGATCGATACTTGGCCATTAGGCAGTGTGGTCACTCAAGGTTGCCACGCTTCTGTTTCCGCCGTTTGGTCCAACAAAGACGATCCTGTCACAATCGATTATTGCAGCCCTGATAAAATCGATTCTATGCATAAAGTCACACTTGAAGTGAAAGGAGAACCCCAGATCAAAAACTTGTCCGAGAAGCTGAAATCTGGTGGTATCATACACAAACTGTGGATTGAGCAACCTGAAAACATCCCTACTTGCCTTGCCACAAAACCTTACCCTAAATCAATTGTATCTTCATATTTTAAGAAGTTGAAACTCTGCAAGTGA 558 0.4839 MAYTLPSLRLFNPSGSAFSSTKFSGTLHAASFSNQTSRLTSHSMSQPAVTDSSTLSTPEVAPSPPDNADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKDDPVTIDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLKSGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01128 185 MobiDBLite consensus disorder prediction 38 61 - -
Vivi3g01128 185 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 36 185 IPR042237 -
Vivi3g01128 185 Gene3D Bit1 71 185 IPR023476 -
Vivi3g01128 185 MobiDBLite consensus disorder prediction 38 64 - -
Vivi3g01128 185 Pfam Peptidyl-tRNA hydrolase PTH2 72 184 IPR002833 GO:0004045
Vivi3g01128 185 CDD PTH2_like 71 184 - -
Vivi3g01128 185 SUPERFAMILY Peptidyl-tRNA hydrolase II 71 184 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01128 Vivi-Chr3 18856511 18859289 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01128 K05969 - gmx:100788281 269.626