Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01115 ATGTTGGAATTACTTTACTCCCCTCCTCTATGGGCAACTCTTATCGCCGCTGCTTTTCTCCTTACCACTCTTACTCTCTCCCTCTATCTTCTTTTTGAGCATCTTTCCGCTTATAAGAATCCCGAAGAGCAGAAGTTCTTGATTGGTGTTATCCTCATGGTTCCCTGCTACTCTATTGAATCTTTTGTGTCCTTGGTCAATCCTTCCATTAGTGTTGACTGCGAGATACTCCGTGATTGCTATGAATCATTTGCCATGTATTGCTTTGGAAGATACCTTATTGCCTGCCTCGGAGGCGAAGAAAGGACTCTTTTGTTTATGGAAAGAGAAGGCCGTGCTACTTTTAAAACTCCTCTTCTCCACCATTCTTCTCACTCTGGCATTATAAACCATCCTTTTCCTCTCAAATACTTCCTTAACCCATGGAAACTTGGTCCCCGCTTTTTCCAAATTGTCAAATCTGGTATTGTTCAATATATGATCATCAAATCTTTTACTGCTGTTTTGGCCGTAATCCTTGAAGCCTTTGGAGTCTACTGTGAAGGAGAATTCAAAGTAGGATGTGGGTATCCTTATGTGGCAGTGGTTCTAAATTTCAGTCAGTCATGGGCACTGTACTGCCTTGTTCAATTTTATACTGTTACAAAGGAAGAATTGGCTCATATAAAGCCATTGGCCAAATTTTTGACATTTAAATCAATTGTGTTTCTCACTTGGTGGCAAGGTGTGGCAATTGCTCTATTATATACGTTTGGTTTGTTCAAAAGTCCCATCGCACAAGGCTTGCATTTTAAGTCAAGTGTCCAAGATTTCATCATTTGCATTGAGATGGGCATTGCTTCCATAGTTCACCTGTATGTATTTCCAGCAAAGCCTTATGAGCTAATGGGAGAGCGCCTCTCAGGAAGTGTTTCAGTTCTGGGAGATTACTCTGCTGATTGTCCTCTTGACCCTGATGAGATTAGAGACAGTGAGAGACCCACAAAACTGCGTCTTCCTGCACCTGATGTTGATGCCAAGAGTGGGATGACAATTAGAGAGAGTGTTCGTGATGTTGTTATTGGCGGCGGTGGATATATTGTTAAAGATGTGAGGTTCACGGTCCATCAAGCAGTGGAGCCTGTGGAAAAGGGGTTCACTAGATTCAATGAAAAACTACATAAGATATCCCAAAACATTAAAAAGCATGAGAAAGATAAAAGAAGAATCAAGGATGACAGCTGCATCGGGTCATCATCACCTGCAAGGAGGTTGATTCGGGGAATCGATGATCCCCTCTTGAATGGGAGTGTCAGTGATAGTGCGATGTCGAGGGGAAAGAAGCACCACCGTCGGAAATCTGGATATACGAGTGGAGAGAGTGGTGGAGAAAGCAGTAGTGATCAAACCTATGGTAGCTACCAGGTTAGGGGCCATAGGTGGGTTACTAAAGAGTAA 1437 0.4273 MLELLYSPPLWATLIAAAFLLTTLTLSLYLLFEHLSAYKNPEEQKFLIGVILMVPCYSIESFVSLVNPSISVDCEILRDCYESFAMYCFGRYLIACLGGEERTLLFMEREGRATFKTPLLHHSSHSGIINHPFPLKYFLNPWKLGPRFFQIVKSGIVQYMIIKSFTAVLAVILEAFGVYCEGEFKVGCGYPYVAVVLNFSQSWALYCLVQFYTVTKEELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYTFGLFKSPIAQGLHFKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGERLSGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPAPDVDAKSGMTIRESVRDVVIGGGGYIVKDVRFTVHQAVEPVEKGFTRFNEKLHKISQNIKKHEKDKRRIKDDSCIGSSSPARRLIRGIDDPLLNGSVSDSAMSRGKKHHRRKSGYTSGESGGESSSDQTYGSYQVRGHRWVTKE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01115 478 Pfam Organic solute transporter Ostalpha 13 293 IPR005178 -
Vivi3g01115 478 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 9 437 IPR005178 -
Vivi3g01115 478 SMART Solute_trans_a_2 12 293 IPR005178 -
Vivi3g01115 478 MobiDBLite consensus disorder prediction 392 414 - -
Vivi3g01115 478 MobiDBLite consensus disorder prediction 392 407 - -
Vivi3g01115 478 MobiDBLite consensus disorder prediction 451 469 - -
Vivi3g01115 478 Coils Coil 386 406 - -
Vivi3g01115 478 MobiDBLite consensus disorder prediction 429 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01115 Vivi-Chr3 18641543 18647565 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01115 - - gmx:100807030 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01115 3 18641543 18647565 Vivi3g01115 3 18641543 18647565 ECH