Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01106 ATGGAAGGGAAGAGAAACGTCCGCATCTGCTGTTTATGCAACCAAAGAAGAGCTTCTCTCAAGAGACCCAAAACCCTTCAACAGATTTGCACTCAATGTTTCTACCTCGCCTTCGAAAACGAGATTCACCAAATCATCATTTCCAACCGTCTCTTCACCCGCGGGGACCGCGTCGCCATCGGCGCTTCCGGCGGTAAAGACTCCACCGTCCTCGCCTACGTTTTATCCAAACTCAACCGCGACCACGACTACGGCCTCCACCTCTCCCTCCTCTCCGTCGACGAAGGCATCACCGGCTACCGCGACGATTCCCTCGAAACCGTTCATAGAAACCAGATTCAGTATGGATTGCCTCTCAAAATTGTCTCCTACAAGGATTTATACGGCTGGACGATGGACGAGATTGTCAAACAGATCGGTTTGAAGAACAATTGCACCTTCTGCGGCGTTTTCCGTCGTCAGGCGCTTGATCGGGGAGCGGCTTTCCTGAAGGTGGATAAACTGGTGACTGGACACAACGCCGACGACATTGCGGAGACGATTTTGTTGAATATATTGAGAGGTGATATAGCTAGATTGAGTAGATGCAGTTCAATTGTAACAGGTGAAGATGGACCAATCCCTAGATGTAAACCTTTTAAGTATACTTATGAAAAAGAGATTGTTATGTATGCATATTTCAAGAAGCTTGATTACTTTTCCACTGAATGTATTTATTCTCCAAATGCTTATCGTGGTTTTGCTCGCGAGTTCATCAAGGATTTGGAGAGAATCAGACCCAGAGCCATTCTCGACATCATCAAATCTGGAGAGAATTTCAGGATTTCTACCACTACTAAAATGCCAGAGCAGGGAACGTGTGAACGCTGTGGTTATATTTCAAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGATTGAATCGAGGTTTGCCTAAACTGGGAATTGGACGGAGTCGGGTTGGCAATGGTTGCAAGGAAGAAAATGAAAATGAAAGTCGTGGAAGAAAGAGCATTGAGAGCAAACAATGTGGATCTTTGGACTTCTGA 1053 0.4587 MEGKRNVRICCLCNQRRASLKRPKTLQQICTQCFYLAFENEIHQIIISNRLFTRGDRVAIGASGGKDSTVLAYVLSKLNRDHDYGLHLSLLSVDEGITGYRDDSLETVHRNQIQYGLPLKIVSYKDLYGWTMDEIVKQIGLKNNCTFCGVFRRQALDRGAAFLKVDKLVTGHNADDIAETILLNILRGDIARLSRCSSIVTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVGNGCKEENENESRGRKSIESKQCGSLDF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01106 350 Gene3D HUPs 9 329 IPR014729 -
Vivi3g01106 350 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 274 - -
Vivi3g01106 350 MobiDBLite consensus disorder prediction 326 344 - -
Vivi3g01106 350 CDD Alpha_ANH_like_II 57 243 - -
Vivi3g01106 350 Pfam Zinc-ribbon 285 315 IPR032442 -
Vivi3g01106 350 MobiDBLite consensus disorder prediction 326 350 - -
Vivi3g01106 350 PIRSF ATPase_YdaO 6 317 IPR035107 GO:0008033
Vivi3g01106 350 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 8 320 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vivi3g01106 350 Pfam PP-loop family 58 245 IPR011063 -
Vivi3g01106 350 NCBIfam TIGR00269 family protein 207 306 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vivi3g01106 350 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 9 333 - -
Vivi3g01106 350 FunFam Cytoplasmic tRNA 2-thiolation protein 1 10 327 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01106 K14168 - gmx:100816096 618.231