Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01101 ATGAGCGCCGTCAACATCACCAACGTCACCGTCCTCGATAACCCCGCTTCCTTTCTCGCTCCTTTTCAGTTCGAGATTTCCTACGAGTGCTTAGCCGCTCTCAAAGATGATTTGGAATGGAAGCTCATTTACGTTGGATCTGCTGAGGATGAGACTTATGACCAGTTGTTAGAGAGTGTTCTTGTTGGTCCTGTCAATGTTGGAAACTATCGATTTGTTTTACAGGCGGATCCACCGGACCCGACCAAGATTCGTGAAGAAGATATAATTGGTGTTACTGTGCTTTTACTCACTTGCTCTTATTTGGGTCAAGAGTTTATTCGCGTTGGTTATTATGTCAACAATGATTATGACGATGAACAGCTGAGGGAGGAGCCTCCGACTAAGGTTTTGACGGATAGGGTTCAGAGGAACATTTTATCGGATAAACCTAGGGTTACCAAGTTCCCGATCAATTTCCACCCTGAGAACACTGAAATTGAAGAGCAACCCGTTGCATCGGAGCAACAGCCTGAAACTGTTGAAGATCCATCGGCTGTAGCTGACTGTGATCCCCTAAATGAGGGGGACAAAAAAGAGGATTCTTAA 588 0.4524 MSAVNITNVTVLDNPASFLAPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPTKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENTEIEEQPVASEQQPETVEDPSAVADCDPLNEGDKKEDS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01101 195 SUPERFAMILY ASF1-like 1 153 IPR036747 GO:0005634|GO:0006325
Vivi3g01101 195 Gene3D - 1 157 IPR036747 GO:0005634|GO:0006325
Vivi3g01101 195 PANTHER ANTI-SILENCING PROTEIN 1 1 171 IPR006818 GO:0005634|GO:0006325
Vivi3g01101 195 MobiDBLite consensus disorder prediction 154 195 - -
Vivi3g01101 195 FunFam Histone chaperone ASF1 1 157 - -
Vivi3g01101 195 Pfam ASF1 like histone chaperone 1 153 IPR006818 GO:0005634|GO:0006325
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01101 Vivi-Chr3 18434663 18436006 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01101 K10753 - gmx:100801694 338.961