Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01094 ATGGAGGAAGCCACCGTGTCGTCACCATCACGCGAGAAGGAGAAAGATAACGGAACAATCACCAATTCGACGCGCCAATCTTTAAAATCCGATTCTCAATTCAACAATTACCAACTCTGGAAACAAAAGTTAAGGGATAATTGCTTCAAAAGAGTGCGACAAGACAGAACCCGCTTGCTCTGGAAATGTAGGCTCTCCTCCTCGCCACCAGCCTCTCCATCACAAAATCTTCATCAGGATCAGTTGGACATTGAATTCCGCGATATTGTATCCAATGAATTCCATAAAATTATCAATCGCGATAATGACGATGAGGATGATGATCTGTTATGGGACGATCAAAGTCCTCATACCACGTACGAAGGTGATGATTGCCAAGAGATATTGCTTGAAATGCAAAGGATATTTTATGAAGACCTCGAACAACAAGAAACCGCAGTTGATACTTGGGAAGATGAAGTGGATGATTACTTGGCTCGTGCAGTTTATGAGCATATGGATCTAAATGCAGATAATACATGTAGAAAAGAGATTTGGTGCCCTGTTTGTAAGAATGGAGAGCTTAAAGACACTCATAATCTCATATATTGCACTCGTTGTAAACTTCAACTTACCAAAGCTGAAGAGCTTACTTTGGACTTTTTGCGAGACCGGCTTGCTGAAGTCCATATGGAGCATCTTGACAGAGGTTGCAAATTAAAGCCCAGATTTTGTATAAAGACAAAATTTAATTTAACTGCGTTATACATTATGTGTGAAGGTTGTCAAACATTTGAGATTGTAATTTAA 789 0.398 MEEATVSSPSREKEKDNGTITNSTRQSLKSDSQFNNYQLWKQKLRDNCFKRVRQDRTRLLWKCRLSSSPPASPSQNLHQDQLDIEFRDIVSNEFHKIINRDNDDEDDDLLWDDQSPHTTYEGDDCQEILLEMQRIFYEDLEQQETAVDTWEDEVDDYLARAVYEHMDLNADNTCRKEIWCPVCKNGELKDTHNLIYCTRCKLQLTKAEELTLDFLRDRLAEVHMEHLDRGCKLKPRFCIKTKFNLTALYIMCEGCQTFEIVI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01094 262 PANTHER RPA-INTERACTING PROTEIN RPAIN 21 262 IPR028156 -
Vivi3g01094 262 Coils Coil 140 160 - -
Vivi3g01094 262 MobiDBLite consensus disorder prediction 1 28 - -
Vivi3g01094 262 Pfam Replication protein A interacting C-terminal 179 259 IPR028159 -
Vivi3g01094 262 MobiDBLite consensus disorder prediction 1 19 - -
Vivi3g01094 262 Pfam Replication protein A interacting N-terminal 34 65 IPR028158 -
Vivi3g01094 262 Pfam Replication protein A interacting middle 86 162 IPR028155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01094 Vivi-Chr3 18368596 18371896 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01094 - - vvo:131660476 533.102