LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g01090	ATGGAGTTGGCGCAACTGGAAGCATTGTGTGAGAGGCTTTACAATTCTCAGGACTCAGTTGAACGTGCTCATGCGGAGAATACACTGAAATGCTTCTCTATGAACACTGAATACATTTCTCAATGCCAATATATTCTTGATCATGCTTTGACACCTTATGCATTGATGCTTGCTAGTTCTAGTTTGTTGAAACAAGTTACCGAACATAGTCTTGATTTGAAGCTCCGTCTCGATATATGGACCTACCTGATCAACTATCTAGGGACCAGAGGACCTGAGTTACAGCCGTTTGTGACTGCTTCTCTGATCCAACTTTTGTGTCGAGTAACGAAATTCGGATGGTTTGATGATGATAGATTTCGGGACTTGGTCAAAGAATCAATGAACTTCTTGAGTCAGGCAACACCGGGTCATTATGCCATTGGTTTGAGGATATTGAATCAGCTTATTTCTGAGATGAATCAGGCTAATGCTGGGTTACCTGCAACAAAGCATCGAAGAGTAGCTTGCTCCTTCAGGGATCAATCTCTTTTTCAAATATTTCAGATATCTCTAACATCATTGAGTCAGTTGAAGAATGATGCAATCAGTCAGTTGCAAGAATTGGCACTTTCTCTCTCTTTGAAATGTTTATCATTTGATTTTGTGGGGACATCTGTGGATGAAAGTTCCGATGAGTTTGGCACAGTTCAGATTCCATCACCCTGGAAATCAGTCTTGGAGGATTCTTCAACGTTACAACTATTTTTTGATCACTATGCCATTACAAAGCCTCCTCTTTCGAAGGAGGCACTGGAGTGCTTAGTGCGACTAGCGTCTGTAAGACGTTCTTTGTTTACAAATGATGCTACCCGGTCCAAGTTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATAATAATTACCATGAGTTTTGCCGTCTTCTTGGTCGGTTCAGAGTGAATTACCAGTTGTCAGAGCTAGTTAATGTGGAAGGTTATAGCGATTGGATACGTTTGGTTGCAGAGTTCACTCTTAAATCTTTGCAGTCATGGCAGTGGGCCAGCAACAGTGTCTACTACCTGTTAGGGTTGTGGTCTAGATTGGTGGCTTCTGTTCCATATTTGAAGGGTGATGCACCAAGCTTACTCGGTGAATATGTTCCTAAGATTACTGAAAGTTTCATCACATCAAGATTCAATTCCGTGCAGGCTGGATTACCTGATGATCTTGAGAACCCCTTAGACAATGCTGAACTTCTTCAGGATCAATTAGATTGCCTTCCAAATCTATGCAGATTTCAGTATGAAAGCAGTAGTTTATTTATAATAAACATAACGGAGCCTGTCCTGCAAATATACACGGAAAGGGCAAGATTACAGATTAGTGATAGCAATGACCTCTCTGTGATTGAAGACAAGCTTGCTTGGATTGTTCATATTGCTGCAGCAATTCTCAAGACAAAACAATGTAATGGTTGCAGTGTGGAATCTCAGGAAGTGCTAGATGCCGAAATTGCAGCTCGAGTTCTGCAGTTGATTAATGTAACTGACAGTGGAGTGCACAGTCAGAGGTATGGTGAAGTAAGCAAACAAAGACTTGATAGGGCAATACTTATTTTTTTTCAGCATTTCCGAAAATCTTATATAGGAGATCAAGCAATTCATTCTTCCAAGCAGTTATATGCCCGGCTATCAGAGCTTCTTGGCCTACACGATCATCTATTACTGTTGAATATGATTGTTGGCAAGATAGCAACTAACCTGAAGTGTTACATTGAGAGTGAAGAGGTCATTGATCACACTTTAAGTTTGTTCTTGGAGCTTGCAACTGGCTTCATGACTGGGAAGCTACTTATGAAGTTGGATACAGTGAAGTTTATCATTGCCAATCATACGAGGGAACATTTTCCATTTTTGGATGCAAAGAAGTGCTCCCGCAGCAGAACGATTTTCTATTACACAATTGGCTGGTTGATATTCATGGAGGATTGTCCTGTTAAATTTAAATCTTCAATGGATCCACTCCAGCAGGTTTTCCTCAATTTGGAATCAACTCCCGATTCAGTGTTTCGAACAGATGCCGTTAAATATGCACTTGTTGGTTTGATGAGAGACCTTAGAGGAATTGCAATGTCCACAAATAGCCGCCGAACTTATGGCTTTTTATTTGACTGGTTGTATCCCGCACACATGCCTCTAATCTTAAAAGGAATCTCACATTGGACTGACACCCCAGAGGTTACGACCCCATTGTTGAAGTTCATGGCTGAGTTTGTGCTAAATAAATCTCAACGTTTGACATTTGACTCGTCTTCTCCAAATGGGATACTTCTCTTCAGAGAAGTCAGCAAACTGATTGTCGCCTATGGATCTAGAATTTTGACTTTTCCAAATGCTGCGGATGTATATACATACAAGTACAAAGGAATATGGATATGTTTAACAATACTATCAAGAGCCCTTTCAGGAAACTATGTCAACTTTGGTGTGTTTGAGTTATACGGTGACAGAGCTCTATCCGATGCACTTGATGCTGCTCTAAAGATGACACTGTCAATTCCCATGTCTGATATATTGGCTTATCGAAAGCTAACAAAGGCTTATTTTGCATTCTTGGAGGTTTTGTTCTACAGCCACCTCACTTTCATCTTGAGCTTGGACACAAACACCTTTGTGCATTTAGTTGGCTCCCTCGAATCTGGTCTAAAAGGCTTGGATACAAGTATATCATCACAGTGTGCATCTGCTGTTGATAACTTGGTTGCTTTCTATTTTAACAACATCAAATTGGGAGAGAATCCAAATTTACCTGCATCGGTCAATCTTGCTCGTCATATTGCAGAGTGTCCCACTCTCTTCCCAGAAATTTTGAAGACTCTGTTTGAGATCTTATTGTTTGAAGACTGTAGCAACCAATGGAGCCTGAGCAGGCCAATGTTAAGCTTGATACTCATTAATGAGAAGACATTCTCTGATTTGAAAGCTCAAATCTTGTCATCACAGCCAATAAATCGTCAAAAGCAGCTCTCTCTATGTTTTGATAAACTTATGGCAGACATAACTGAAAAATTAGACTCAAAAAACAGGGATAGGTTTACTCAAAACCTCACCATATTTCGGCATGACTTCCGTGCCAAATAA	3153	0.4047	MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLDLKLRLDIWTYLINYLGTRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLRILNQLISEMNQANAGLPATKHRRVACSFRDQSLFQIFQISLTSLSQLKNDAISQLQELALSLSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKSVLEDSSTLQLFFDHYAITKPPLSKEALECLVRLASVRRSLFTNDATRSKFLAHLMTGTKVILQTGQGLADHNNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVASVPYLKGDAPSLLGEYVPKITESFITSRFNSVQAGLPDDLENPLDNAELLQDQLDCLPNLCRFQYESSSLFIINITEPVLQIYTERARLQISDSNDLSVIEDKLAWIVHIAAAILKTKQCNGCSVESQEVLDAEIAARVLQLINVTDSGVHSQRYGEVSKQRLDRAILIFFQHFRKSYIGDQAIHSSKQLYARLSELLGLHDHLLLLNMIVGKIATNLKCYIESEEVIDHTLSLFLELATGFMTGKLLMKLDTVKFIIANHTREHFPFLDAKKCSRSRTIFYYTIGWLIFMEDCPVKFKSSMDPLQQVFLNLESTPDSVFRTDAVKYALVGLMRDLRGIAMSTNSRRTYGFLFDWLYPAHMPLILKGISHWTDTPEVTTPLLKFMAEFVLNKSQRLTFDSSSPNGILLFREVSKLIVAYGSRILTFPNAADVYTYKYKGIWICLTILSRALSGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTKAYFAFLEVLFYSHLTFILSLDTNTFVHLVGSLESGLKGLDTSISSQCASAVDNLVAFYFNNIKLGENPNLPASVNLARHIAECPTLFPEILKTLFEILLFEDCSNQWSLSRPMLSLILINEKTFSDLKAQILSSQPINRQKQLSLCFDKLMADITEKLDSKNRDRFTQNLTIFRHDFRAK	1050

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi3g01090	1050	Gene3D	-	1	519	IPR011989	-
	Vivi3g01090	1050	FunFam	ARM repeat superfamily protein	1	528	-	-
	Vivi3g01090	1050	Coils	Coil	3	23	-	-
	Vivi3g01090	1050	SUPERFAMILY	ARM repeat	1	979	IPR016024	-
	Vivi3g01090	1050	PANTHER	EXPORTIN 4,7-RELATED	2	1048	IPR044189	GO:0005049\|GO:0051169
	Vivi3g01090	1050	FunFam	ARM repeat superfamily protein	834	1049	-	-
	Vivi3g01090	1050	Gene3D	-	832	1049	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g01090	Vivi-Chr3	18329626	18352228	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g01090	K18460		-	gmx:100804346	1889.39