Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01083 ATGATCGTTCAAGGCCCCAATTTTCCTTTTCCTCATTCTAGTAATTCAAATGTCTATGATGCTACTACCACTAAACATAACTACACTGAGTTTCATCCAGAAAAGTTAGAGGTGAATCAGCTTATCGAGTCACAGAAAGAGACATTGAGAATATTGATTCAAGAGCATGAAAATCAACAACAAGTGATGACAATATTGAAGAACGAAGAATTAAATTTCTCTTATATGCTAGCACAAAAGGATAAACAAATAGGAGAAATGACAAATATAAACCTGGAATTGGAAGAATATTCAACAAAATTAGAGACCGATAATCAATTGTGGCGAAAAATTACTTATGAAAATGAATGCATGGTTTTGTCTCTCGATAATTCCTTAGAACAAATCAAAAGAAAAAATTCATATTATCCTGAAGATATGGAGTCATGTTGTGACATGGAAGTGCTTGAAGAAGAAACAGCTGAGAATAGTATAGTGTGTGATGATCATGGAATTGCAACAAGTTTTAACATGATTTGCAAATGTTGTTATTTGAATGAATCAACTTTCTTGTTTCTTCCTTGTCGGCATCTTTGTTCGTGTAAACCATGTGAGCATTTTCTCAAATCATGTCCGGTGTGTTTAACGGGAAAGAAAACTAGTATAGAGATCCTCTGTTTTCAAGATTTAAGTTATTAG 678 0.3304 MIVQGPNFPFPHSSNSNVYDATTTKHNYTEFHPEKLEVNQLIESQKETLRILIQEHENQQQVMTILKNEELNFSYMLAQKDKQIGEMTNINLELEEYSTKLETDNQLWRKITYENECMVLSLDNSLEQIKRKNSYYPEDMESCCDMEVLEEETAENSIVCDDHGIATSFNMICKCCYLNESTFLFLPCRHLCSCKPCEHFLKSCPVCLTGKKTSIEILCFQDLSY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01083 225 Coils Coil 39 69 - -
Vivi3g01083 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 218 IPR013083 -
Vivi3g01083 225 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 29 217 IPR017066 -
Vivi3g01083 225 Pfam Zinc finger, C3HC4 type (RING finger) 172 209 - -
Vivi3g01083 225 PIRSF SBP1_RNase_bind 12 220 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01083 Vivi-Chr3 18211767 18213141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01083 137 220 Miscellaneous Gene Families AT4G39050 30.952 5.48e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01083 K19042 - pvy:116108389 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01083 3 18211767 18213141 Vivi3g01083 3 18211767 18213141 ECH