Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01011 ATGTCTTCTCCTACTTCGGTAGATTCGTCTCATCACAATAGTAATGGAAATTTGAAAAATCTAGACACTCTATGTCCTGTGGCAGAAATTGAGGAATTTGATTTTTCTAAAGTACTATTAGATAAGCCAAGGACTTTGAACATTGAGAGACAAAGATCATGCGACGAAAGATCAATGAGTGAACTATCAATAGGCCTTTCTCCTCGGCTACTGGCCACAAAAATTGATACCTTTTCTCGGTTAGGAGATCATCTTGATTCCCCTATGCCAAAATCAGGTCTTAACACTCCAAGATCACTGGTATTGGACTCTCATTCAATAATGCCTGAAGCTTGGGATGCTTTGAGGCGTTCCTTGGTGCATTTTCGAGGGGAGCCAGTTGGGACTATTGCTGCCATGGAAGATTCTGATGAGAAACTTAACTACGATCAGGTTTTTGTAAGAGACTTTGTTCCAAGTGCTTTGGCTTTTTTGATGCACGGGGAACCAGAAATTGTCAAGAATTTTCTCTTGAAGACTCTTCGTCTTCAGTCATGGGAGAAAAAGATTGATAGGTTCCATCTGGCAGAAGGGGTGATGCCTGCTAGTTTTAAGGTGTTCCATGATCCAGTCACAAACCGTGAAACCCTGATAGCAGATTTTGGAGAAAGTGCAATAGGCAGGGTTGCCCCTGTTGATTCTGGATTTTGGTGGATTATATTACTTCGTGCATACACAAAATCTACAGGAGACTCTTCTTTGGCTGAACAGCCTGAATGTCAAAAGGGTATGCGTTTGATTCTGAGTTTATGCTTGTCAGAGGGTTTTGATACATTTCCAACATTACTATGTGCTGATGGGTGCTGCATGATTGATCGTAGAATGGGTGTTTATGGGTATCCAATTGAAATTCAAGCATTGTTCTTCATGGCTTTAAGATGTGCCCTGCGATTGCTTAAGCCAGATGCCGAAGGGAAAGAGTTTATGGAACGAATTACGAAACGCTTGCATGCCTTAAGCTACCATATGAGAAGCCATTTTTGGTTGGATTTGAAGCAACTTAATGATATATATCGCTTCAAAACAGAAGAGTACTCACATACTGCAGTGAACAAGTTCAACGTTATTCCGGATTCTCTACCAGATTGGATTTTTGATTTCATGCCTCATTACGGTGGATACTTTATTGGGAATGTGAGTCCTGCTAGGATGGATTTCCGCTGGTTTTGCCTTGGTAATTGCATTGCAATTTTGTCCTGCTTGGCAACTCCTGAGCAGTCAGTTGCAATCATGGATCTCATAGAATCACGGTGGGATGAATTGATTGGGGAGATGCCTGTCAAAGTTTGTTATCCAGCCCTTGAAACACATGAATGGAGAATCATAACAGGATGTGACCCAAAAAATACTAGATGGAGTTACCACAACGGGGGATCTTGGCCAGTTATGTTATGGTTTTTGTCTGCGGCGGCCATCAAGACTGGGCGACCCCAAATTGCAAAACGCGCCCTTCAAATTGCTGAAACCAGATTGCTAAAAGACAACTGGCCTGAATATTATGATGGAACGAATGGTCGATACATTGGGAAGCAGGCTCGAAAATGCCAAACCTGGTCTATTGCTGGTTACTTGGTGGCTAGGACGATGCTTGATGACCCTTCACATTTAGGTATTATAGCACTTGAAGAAGATAGACAACTAACACAGCCCATGCACAAGAGATCAAATTCATGGATTTTGTGA 1722 0.4204 MSSPTSVDSSHHNSNGNLKNLDTLCPVAEIEEFDFSKVLLDKPRTLNIERQRSCDERSMSELSIGLSPRLLATKIDTFSRLGDHLDSPMPKSGLNTPRSLVLDSHSIMPEAWDALRRSLVHFRGEPVGTIAAMEDSDEKLNYDQVFVRDFVPSALAFLMHGEPEIVKNFLLKTLRLQSWEKKIDRFHLAEGVMPASFKVFHDPVTNRETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAEQPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALRLLKPDAEGKEFMERITKRLHALSYHMRSHFWLDLKQLNDIYRFKTEEYSHTAVNKFNVIPDSLPDWIFDFMPHYGGYFIGNVSPARMDFRWFCLGNCIAILSCLATPEQSVAIMDLIESRWDELIGEMPVKVCYPALETHEWRIITGCDPKNTRWSYHNGGSWPVMLWFLSAAAIKTGRPQIAKRALQIAETRLLKDNWPEYYDGTNGRYIGKQARKCQTWSIAGYLVARTMLDDPSHLGIIALEEDRQLTQPMHKRSNSWIL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01011 573 FunFam probable alkaline/neutral invertase B 136 539 - -
Vivi3g01011 573 SUPERFAMILY Six-hairpin glycosidases 119 539 IPR008928 GO:0005975
Vivi3g01011 573 PANTHER - 104 570 IPR024746 GO:0033926
Vivi3g01011 573 Pfam Alkaline and neutral invertase 111 546 IPR024746 GO:0033926
Vivi3g01011 573 Gene3D - 138 542 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01011 Vivi-Chr3 16922023 16925924 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01011 - - lja:Lj1g3v3343910.1 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01011 3 16922023 16925924 Vivi3g01011 3 16922023 16925924 ECH