Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00907 ATGCAATCCATGCAAATAAAAGAAGATAAAGATGATCAGCACGGGCAGGTTGATTCTGCCTCTGCCCTCCAACAATATCTTGATCACATAACTGTTACCTCAATATCTGGCATATACAATTCACTTGTGTTGGAAATAAAAGCTGGAGACACTATAAGGGATGCGATTCATATGTTGTACGAAAAGGAAACCTTTGGTGCAGCCATTGTTGATGTTTTGGATACTGAAACATCCGATGTAAGATTTTCCGATCGCTATATCGGTTTCATTTCTTTTCCAAACATCATTCTTTGGTGTCTCGAGGAATATGAAAACATAAAGGAAGATGCCAATGACAATCACAGTCACCTTAAAGATATTGAGCATGATGACCTTTTCTCCATCCTAGACCAGATCCCTCAGATTGGCCAAACCAAGGTTGGCGAGTTGGCTAAGTCATTCCTCTGGGAACCATTTTTTCCGGTACACTTGAATGACACGATTCTGCACGCATTGTTACTTCTTTCTAAGCATAGGCTGCAAGTTTTGCCTGTCATACAACAACCAGATGCCCCCCTCATCGGTTTTGTTACCCAGAATGCTCTAGTTGAACTACTTCTTCGATCAAGCGAACTAGAGTGGTTTGATAATATTGCAAACAAGAACTTGTCAGATTTCCGATTTGAAGGCCAAGAACATCCTAGATGTGTATTTGGGAGCCAAACTGTTGCAGATGCTTTGAAGCTGCTATGGCAGAACCAAACCTGTGCAGTCGCAGTTGTGGATCGACAAACCAAGAAGCTTGTCGGTAATTTGAGGAACAGTGACATTTATAATCTTGTAAAGAAAGACGAACTCTTTAGAAATAGAAGGATATTAACGGTTGAAGAATTTCTTCGCACAGAGACTGAACCAATCATTGAAAATGAACATGGTGCTGATCAAACTGCAGGAAGTCTCCACCTGAAAAACAGCTTCAAATCCAGAATGGATTCGCCAGTAACTAACAAGGAAAATGACACGCTGAAGCAAGTAATGGACCAAATGGCAAAGACTAATAGCTGTTTCAGTTTTCTGATAAATGATAATGAGCAAGTTACTGGTTTGATAACAGTGAGAGATATAATTCTGCAATTTGCACCTCCATGTGTGAATTCTAGTATTGGTGGAGGTGGATTTTTTGAATTGGCTTTGGAGCAGAGTAGATGTCATATTAGTAATGGAACTATCATTCGTAATCGTTGA 1224 0.3995 MQSMQIKEDKDDQHGQVDSASALQQYLDHITVTSISGIYNSLVLEIKAGDTIRDAIHMLYEKETFGAAIVDVLDTETSDVRFSDRYIGFISFPNIILWCLEEYENIKEDANDNHSHLKDIEHDDLFSILDQIPQIGQTKVGELAKSFLWEPFFPVHLNDTILHALLLLSKHRLQVLPVIQQPDAPLIGFVTQNALVELLLRSSELEWFDNIANKNLSDFRFEGQEHPRCVFGSQTVADALKLLWQNQTCAVAVVDRQTKKLVGNLRNSDIYNLVKKDELFRNRRILTVEEFLRTETEPIIENEHGADQTAGSLHLKNSFKSRMDSPVTNKENDTLKQVMDQMAKTNSCFSFLINDNEQVTGLITVRDIILQFAPPCVNSSIGGGGFFELALEQSRCHISNGTIIRNR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00907 407 SUPERFAMILY CBS-domain pair 18 201 IPR046342 -
Vivi3g00907 407 CDD CBS_pair_SF 225 369 - -
Vivi3g00907 407 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 27 372 - -
Vivi3g00907 407 ProSiteProfiles CBS domain profile. 320 380 IPR000644 -
Vivi3g00907 407 CDD CBS_pair_SF 150 270 - -
Vivi3g00907 407 Gene3D - 209 373 IPR046342 -
Vivi3g00907 407 SUPERFAMILY CBS-domain pair 226 372 IPR046342 -
Vivi3g00907 407 Coils Coil 100 120 - -
Vivi3g00907 407 SMART cbs_1 151 200 IPR000644 -
Vivi3g00907 407 SMART cbs_1 226 275 IPR000644 -
Vivi3g00907 407 SMART cbs_1 325 373 IPR000644 -
Vivi3g00907 407 Gene3D - 11 205 IPR046342 -
Vivi3g00907 407 ProSiteProfiles CBS domain profile. 148 205 IPR000644 -
Vivi3g00907 407 Pfam CBS domain 145 200 IPR000644 -
Vivi3g00907 407 Pfam CBS domain 330 369 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00907 Vivi-Chr3 14848691 14850537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00907 - - gmx:100819351 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00907 3 14848691 14850537 Vivi3g00907 3 14848691 14850537 ECH