Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00836 ATGGCACACAAAGTTATTCTGTCTCTCCTCCCTTTTCTCTTGCTCTTGCTGATTAATGACAATGGAAGCTTTGCAAGAGATATGAACCAAGTTGATCAGCCTTACCTTGATGGCTGGCTAAAAAATACTCCACTGAAGAACCAAATACCCTCCCCTGACTCCAACCAAGTTTACCTTGATGGATGGTTGAAAGATACAAGAGGCGAGAAAGCGAAAGTCAACCCTGACTCCAACCAAGTTTACCTTGATGGATGGTTGAAAGATACTAGGGACGAGAAAGCCAAAGCCAACCCTGACTCCAACCAAGTTTACCTTGATGGATGGTTGAAAGATACTAGAGACGAGAAAGCCAAAGCCAACCCTGACTCCAACCAAGTTTATCTTGATGGATGGTTGAAAGATATCAGAGCCGAGAAAGTCAAAGCCAACCCTGACTCCAACCACGTTTTCCTAGATGGATGGTTGAAAGATACCAAAGCAGAGAAAGTTAAAGACAACCTTGACTCCAACCAAGTTTACCTTGATGGATGGTTGAAAGATACTCGGGCTAAGAAAGAAAAAGTCAACCCTAACTCCAACCAAGTTTATCTTGATGGATGGCTGAAAGATACTCGAGATGAAAATGCAAAATTCAACTCTGACTCCACCCAAGTTTACCTTGATGGATGGTTGAAAGATACTCGAGCCGAAAATGCAGACTCTAACCAAGTTTACCTTGATGGATGGTTGAAAGATACCCGAGCCGGAAACGCAAACTCCAACCAAGTTTACCTTGATGGATGGTTGAAAGATACCCAAGCTTTGAAAGAAAAATCGACTCTTGACTCCAACCAACTTTACCTTGATGGATGGTTGAAAGTTAGACAGGTTGGGAAAGAAATATCCTCCCCTAACTCCAACCAAGTTTACCTTGATGGTTGGCTAAAAGATAGCCATGCTGAGAATTCCAAGCAAGCTTACCTTGATGGTTGGTTGAAAAACTCGAATGCAAAGAACCACATTAAAATTGGACAAGATTTGGTTGAATCAAACAGAAAACAACCTTCAAAAGTTGACCATACAGAAGCATTCAAGGTATTTTTTTTTGGAATAGAAGATCTTTATGTAGGGAGCGTAATGACCTTGCAATTTCCTATCGTTGAATATGCTAATTTCTTGCCAAAAAAAGTTGCTGACGATATTCCGGTATCTAAATCACAAATTCCAAGCCTTCTTGATCTATTCTCACTCACAAAAGATTCTCCTCAAGGTGAAGACATGATAGGCATAATTAATCAATGTGAGTATGAACCACAAAAAGGGGAGACCAAGGCTTGTCCTACTTCTTTAGAGTCCATGGTTGAATTTGTTCATAGTGTTATTGGCGCAGATACAAAATATGACATTCATTCGACTAGCTATCCCACAACATCAGCTACACCTTTGCAAAACTACACTGTTTTGGAGATCTCAGAGGATATTTATGCTCCTAAATGGGTAGCATGTCACCCTAGGCCTTACCCATACTTGCTTCACTATTGCCACTACCTAGACATAGGGAGTAAGATTTTCAAGGTTCTTCTAAAGGGTGAATATGGAGACACAATGGATGCTTTGGGAATTTGCCACCTCGACACATCTGCTATGAATCCTACTCATTTTTATTTTGACCTACTTGGAATGAAGCCCGGGGAAGGTCCATTGTGCCATTTCTTCCCTGTTAAGCACCTTCTATGGGTGCCACGCCCACCAGTTGCCACCAAGTGA 1746 0.4147 MAHKVILSLLPFLLLLLINDNGSFARDMNQVDQPYLDGWLKNTPLKNQIPSPDSNQVYLDGWLKDTRGEKAKVNPDSNQVYLDGWLKDTRDEKAKANPDSNQVYLDGWLKDTRDEKAKANPDSNQVYLDGWLKDIRAEKVKANPDSNHVFLDGWLKDTKAEKVKDNLDSNQVYLDGWLKDTRAKKEKVNPNSNQVYLDGWLKDTRDENAKFNSDSTQVYLDGWLKDTRAENADSNQVYLDGWLKDTRAGNANSNQVYLDGWLKDTQALKEKSTLDSNQLYLDGWLKVRQVGKEISSPNSNQVYLDGWLKDSHAENSKQAYLDGWLKNSNAKNHIKIGQDLVESNRKQPSKVDHTEAFKVFFFGIEDLYVGSVMTLQFPIVEYANFLPKKVADDIPVSKSQIPSLLDLFSLTKDSPQGEDMIGIINQCEYEPQKGETKACPTSLESMVEFVHSVIGADTKYDIHSTSYPTTSATPLQNYTVLEISEDIYAPKWVACHPRPYPYLLHYCHYLDIGSKIFKVLLKGEYGDTMDALGICHLDTSAMNPTHFYFDLLGMKPGEGPLCHFFPVKHLLWVPRPPVATK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00836 581 Pfam BURP domain 361 574 IPR004873 -
Vivi3g00836 581 ProSiteProfiles BURP domain profile. 361 575 IPR004873 -
Vivi3g00836 581 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 261 574 IPR044816 -
Vivi3g00836 581 SMART BURP_2 359 575 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00836 Vivi-Chr3 13619332 13621888 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00836 - - psat:127088336 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00836 3 13619332 13621888 Vivi3g00836 3 13619332 13621888 ECH