Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00808 ATGAAAGGTGCGGTTTTTGTTGCAATTGCTGCTTCCATCGGGAATTTTCTTCAGGGTTGGGATAATGCTACCATTGCTGGTTCGATTCTTTACATTAAGAAAGACCTTGCCTTGCAAACAACAATGGAAGGGCTTGTGGTGGCCATGTCTCTGATTGGAGCTACTGTCATTACCACTTGCTCTGGTCCCATCTCAGATTGGCTTGGTCGGAGACCAATGTTGATAATCTCATCCGTGCTGTATTTCTTGGGTAGTTTGGTGATGTTATGGTCTCCTAATGTTTATGTGTTGTGCTTAGCAAGGCTGCTTGATGGATTTGGGATTGGCCTTGCCGTAACTCTTGTTCCGGTTTATATATCGGAGACTGCTCCCTCCGATATAAGGGGATCGTTGAATACACTTCCTCAGTTCAGTGGTTCTGGAGGCATGTTTTTATCGTATTGTATGGTTTTTGGAATGTCATTGAGTGCCTCACCTAGCTGGAGAGTAATGCTCGGGGTTCTTGCTATTCCTTCTCTCTTCTATTTTTTATTGACATTATTTTTCTTGCCCGAGTCTCCTCGATGGCTCGTGAGTAAAGGAAAGATGCTCGAAGCTAAAAAGGTTCTCCAAAAATTACGCGGCCAGGAAGATGTATCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGAGGTGATGCATCTATAGAAGAGTACATAATAGGCCCAGATGATGAGGTGGTGGATGGTCATGAACCAACAACAGATAAAGACAAGGTCCGGTTATATGGATCTCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTAGCTAGACAGGGTTCTGTGGGTCTTGTGTCGCGCCATGGAAGCCTTGCCATGGATCCTCTTGTGACCTTATTTGGCAGTGTTCATGAGAAGCTTCCCGAGTCAGGAAGCATGAGAAGTGCTTTGTTTCCGACTTTTGGAAGCATGTTCAGCACGGCTGATCCTCATATTAAAAATGAAAATTGGGATGAAGAGAGCCTACAAAGAGAAGGTGATGAGTACATGTCAGACGGTGCTGCCGGGGGCTCTGATGATGATTTGCATAGTCCTTTAATCTCACGTCAAACAACCAGCCTTGAAAAAGACATGCCGCCTCCTCTTTCCCATGACAGTATGCTGAATAGCATGAGACGCAACAGTAGTCTCATGCAAGGGACAGGTGAGCCAGTTGGTAGTACCGGGATTGGTGGTGGTTGGCAGCTTGCATGGAAATGGTCTGGTAAAGGCGAGGATGGAAAAAAGAAAGGAGAGTTTAAAAGGATTTATTTGCACGGGGAGGGAGTTTCTGGATCTCGACGTGGATCCATGGTATCAATATCTGGTGAAGGTGACTTTGTCCAGGCCGCTGCCTTGGTTAGCCAACCCGCACTTTACTCTAAGGAGCTAATGGGTGAACAACCAGTTGGACCTGCAATGGTTCACCCATCTAAGACTGCTTCAAATGGGCCCATTTGGCAAGCTCTCCTTGAACCAGGGGTCAAGCATGCATTGTTTGTTGGGATGGGAATTCAACTTCTTCAGCAGTTTTCGGGGATAAATGGAGTTCTATATTACACTCCTCAAATCCTTGAAGAAGCCGGTGTTGCAGTACTTCTTGCAGATTTGGGTCTTAGCTCAACATCCTCGTCTTTTCTTATAAGTGCTGTCACAACCTTGTTGATGCTTCCTTCTATAGGCTTAGCCATGAGGCTTATGGATGTCACTGGCAGAAGACAGTTACTACTTGTCACAATTCCGGTGCTGATAGTGTCACTCGTTATATTGGTCCTTGGAAGCGTAATAAATTTTGGCAGTGTTGTCCATGCAGCGATCTCAACTATATGCGTCGTGGTTTACTTTTGCTTCTTTGTTATGGGTTATGGACCAATTCCAAACATCCTCTGCGCAGAGATCTTTCCCACTAGAGTGCGTGGGCTCTGCATTGCTATCTGTGCGCTAGTGTTCTGGATTGGAGACATCATCGTCACATACTCACTACCTGTGATGCTCAGTTCATTAGGACTGTCCGGTGTCTTTGGCGTTTACGCAGTTGTGTGTTGCATCTCTTGGGTATTTGTGTATCTGAAGGTTCCGGAAACAAAAGGCATGCCCCTTGAAGTCATATCTGAATTCTTTTCTGTCGGTACAAAGAAAGCGGAAGCTGCGAAAGACGAGTGA 2187 0.4591 MKGAVFVAIAASIGNFLQGWDNATIAGSILYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPISDWLGRRPMLIISSVLYFLGSLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSASPSWRVMLGVLAIPSLFYFLLTLFFLPESPRWLVSKGKMLEAKKVLQKLRGQEDVSGEMALLVEGLGIGGDASIEEYIIGPDDEVVDGHEPTTDKDKVRLYGSQAGLSWLAKPVARQGSVGLVSRHGSLAMDPLVTLFGSVHEKLPESGSMRSALFPTFGSMFSTADPHIKNENWDEESLQREGDEYMSDGAAGGSDDDLHSPLISRQTTSLEKDMPPPLSHDSMLNSMRRNSSLMQGTGEPVGSTGIGGGWQLAWKWSGKGEDGKKKGEFKRIYLHGEGVSGSRRGSMVSISGEGDFVQAAALVSQPALYSKELMGEQPVGPAMVHPSKTASNGPIWQALLEPGVKHALFVGMGIQLLQQFSGINGVLYYTPQILEEAGVAVLLADLGLSSTSSSFLISAVTTLLMLPSIGLAMRLMDVTGRRQLLLVTIPVLIVSLVILVLGSVINFGSVVHAAISTICVVVYFCFFVMGYGPIPNILCAEIFPTRVRGLCIAICALVFWIGDIIVTYSLPVMLSSLGLSGVFGVYAVVCCISWVFVYLKVPETKGMPLEVISEFFSVGTKKAEAAKDE 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00808 728 Coils Coil 722 728 - -
Vivi3g00808 728 SUPERFAMILY MFS general substrate transporter 5 709 IPR036259 -
Vivi3g00808 728 FunFam Monosaccharide-sensing protein 2 468 717 - -
Vivi3g00808 728 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 PRINTS Sugar transporter signature 616 637 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 PRINTS Sugar transporter signature 517 527 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 PRINTS Sugar transporter signature 639 651 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 MobiDBLite consensus disorder prediction 324 360 - -
Vivi3g00808 728 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 704 IPR020846 GO:0022857
Vivi3g00808 728 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 723 - -
Vivi3g00808 728 Gene3D MFS general substrate transporter like domains 488 727 IPR036259 -
Vivi3g00808 728 MobiDBLite consensus disorder prediction 327 342 - -
Vivi3g00808 728 FunFam monosaccharide-sensing protein 2 2 247 - -
Vivi3g00808 728 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 Gene3D MFS general substrate transporter like domains 2 241 IPR036259 -
Vivi3g00808 728 Pfam Sugar (and other) transporter 493 715 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi3g00808 728 Pfam Sugar (and other) transporter 7 219 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00808 Vivi-Chr3 13161358 13165328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00808 1 728 Organic Solute Cotransporters AT4G35300 67.968 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00808 - - gmx:100811857 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00808 3 13161358 13165328 Vivi3g00808 3 13161358 13165328 ECH