Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00803 ATGAGGTTGAATCTGTTTCCGTTTCTCTTCACATTTACCATTCTATCCTCGCATGTCCTATCCACCTCCGATCTAATCCTCACCAAGGTTGACCGTCGTATTGATCTATCTTCACAAATTGTCCGCACCATTACTTCTCTAAAGGTAGAGAATGCAGGATCTGATACTGTATCAGAAATCTTGTTGTCTTTTCCTGATAGCCATGCAAATTACTTGGCACATTTGAAAGCATCAGTTCACGAAGGAAAGGGAAAGGCAAAATCATCTTCTGGTGCTGGTTTACCTTACGAAGTTGTCCAGCCTAAAGATGCTCCCGCTTCGTTGAAAATTTATTCTGTAACTTTACCGAAAGGCCTTGCGAAGGGAGAGAGTCTGACGTTGGATGTATTGGCTGTTTTCACTCACATTTTGCAACCGTTTCCGGAGAAAATTACGCAGGCTGACATTCAGCTTATGCTGTTTCAAGAGACTGCGCAGTATCTTTCTCCTTATCCCGTGAAGGCACAATCGCTTACTGTTAAATTACCTGAGGCGAGGATAGAGTCCTACACGAAATTGGAAAGTGCGAAACTTCAGGGATCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCGTATTCGTTCTTGCCAATTGTTATCCACTTTGAGAATAATCGGCCTTTTGCTGTTGCTAAAGAGTTGGTGCGGGAGATTGAGATTTCCCATTGGGGAAATGTGCAGATCACGGAGCATTATAATCTTGTTCACGGTGGTGCTCAGAGCAAAGGAGAATTCTCAAGGCTTGACTTTCAGACCAGACCAAATGTAAGGGGTGCATCAGCCTTTAGGCGTCTTGTTGCAAGGCTGCCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATCGGCAACATTTCCACTTCTAGTCTGTGGGGTGACTCTAAAAAGACAGAACTGGAGATTGAACCCAGGTATCCAATTTTTGGTGGCTGGAAAACTGCTTTTACTATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGCATCGATGGAAAGCGCTTCCTTAATATTTCGTTTGGTTCCCCCTTTATCGAATTGGTGATTGACACTCTTGTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATACTTCGGCATCTGTTCCATTTTCAGTGAAACAAAGACATGAGACAAAGTTTTCTCACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTGGAGAAAAACAATGCTGTGCCTGAGCATAATGTGCATTTTCAGGTCTATTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCATTGATGTTGATTTCTGGGTTTTTCTTTCTATTCCTTGCCTCTATTGTCTACATGCATGCAGACTTGTCAATCTCCAAGACTTCTGCATCTTATTTGGCTAAGCTCCAATGGGAAGAGGTTCAAGCAACTGTTCACAAGATCCATAATATCATTAGCCTTTGCTTAACAACACATGACAAGCTAGAAGCATCGTTGCGTGATCTTTCTAGGTCAGGAGATATTCAAGCGTGTAAAGCAACCCGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACAAAAGAGTTAAAATCACCCGTAGCATTCTTGCAGTCTTCTCCACAAGCCACACCAATATTACCCAAGGTGGAGGAAGTTATTGCTAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACTCCACTGTTGTTGACTGTTATGAGAAGAAATTAGGAGGAAGAGAAATTGAGAATCGTATTGCTTCACATCAGCAGAAAATTACAGCTCTGAGGCAAGAGATTGACGATCTTCTGGACTTGATTGATGAGATATGA 1842 0.424 MRLNLFPFLFTFTILSSHVLSTSDLILTKVDRRIDLSSQIVRTITSLKVENAGSDTVSEILLSFPDSHANYLAHLKASVHEGKGKAKSSSGAGLPYEVVQPKDAPASLKIYSVTLPKGLAKGESLTLDVLAVFTHILQPFPEKITQADIQLMLFQETAQYLSPYPVKAQSLTVKLPEARIESYTKLESAKLQGSELKYGPYENLPPYSFLPIVIHFENNRPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDFQTRPNVRGASAFRRLVARLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPIFGGWKTAFTIGYGLPLQDFLFGIDGKRFLNISFGSPFIELVIDTLVVKVVLPEGSKDTSASVPFSVKQRHETKFSHLDIAGRPVVVLEKNNAVPEHNVHFQVYYKFNSLSMLREPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKLQWEEVQATVHKIHNIISLCLTTHDKLEASLRDLSRSGDIQACKATRKSVDSSLKELTKELKSPVAFLQSSPQATPILPKVEEVIAKERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALRQEIDDLLDLIDEI 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00803 613 PANTHER RIBOPHORIN I 6 469 IPR007676 GO:0006486|GO:0016020
Vivi3g00803 613 Pfam Ribophorin I 27 453 IPR007676 GO:0006486|GO:0016020
Vivi3g00803 613 Coils Coil 582 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00803 Vivi-Chr3 13049352 13053550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00803 23 551 Miscellaneous Gene Families AT1G76400 66.919 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00803 K12666 - gmx:100817203 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00803 3 13049352 13053550 Vivi3g00803 3 13049352 13053550 ECH