Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00802 ATGACTTCCTCTCACACTTGCAGTGGCAATTCAGTAAATTTCATCCTAAAGAAACCGAACGTTCATTACAGAGGTGGCGCGCTTTCGAATTCTAATATCACCACCACCACCACCACGTTGAGACAACCGCCATTCACGGTGGTCGCACTTTCTCTTTCTCAATCGAGAAGGTCCGCGGCGATTCTCATTTCATCCTTGCCTTTCACCTTCGTTTTCCTCTCTCCACCACCGCCAGCGGACGCCAGAGAAAGACGCAAAAAGAAGAACATTCCCATTGATGATTATCTCACTTCCCCTGATGGATTGAAATACTATGATTTCCTTGAGGGGAAAGGTCCAATAGCTGAAAAAGGTTCAACTGTTCAGGTTCATTTTGATTGTTTATATCGCGGAATTACAGCTATTTCAAGTCGAGCATCTAAAATCCTAGCTGGAAATCGTGTTATTGCTCAGCCATATGAATTCAAGGTGGGATCTCAACCAGGAAAGGAAAGGAAGCGTGAGTTTGTAGACAACCCAAATGGTCTATTCTCTGCACAAGCATCGCCAAAACCTCCACCAGCTATGTACTCAATAGTTGAAGGAATGAGAGTCGGTGGGAAGCGAACTGTGATTGTTACTCCTGAAAAAGGATATGCACAAAAGGGAATGAATGAGATTCCGCCTGGAGCTACATTTGAGCTAAATATTGAACTTTTGCAAGTGGTATCTTCCTGA 717 0.4407 MTSSHTCSGNSVNFILKKPNVHYRGGALSNSNITTTTTTLRQPPFTVVALSLSQSRRSAAILISSLPFTFVFLSPPPPADARERRKKKNIPIDDYLTSPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAISSRASKILAGNRVIAQPYEFKVGSQPGKERKREFVDNPNGLFSAQASPKPPPAMYSIVEGMRVGGKRTVIVTPEKGYAQKGMNEIPPGATFELNIELLQVVSS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00802 238 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 118 236 IPR001179 GO:0003755
Vivi3g00802 238 SUPERFAMILY FKBP-like 84 235 - -
Vivi3g00802 238 FunFam Peptidylprolyl isomerase 78 238 - -
Vivi3g00802 238 Gene3D - 79 238 IPR046357 GO:0003755
Vivi3g00802 238 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 39 237 IPR044180 -
Vivi3g00802 238 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 113 233 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00802 Vivi-Chr3 13041296 13043503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00802 K01802 - gmx:100527183 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00802 3 13041296 13043503 Vivi3g00802 3 13041296 13043503 ECH