Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00796 ATGGGTAGACGTCATGGTTGGGAGCTCCCTTTTCACACTTTTCAGGTTGTGGCTATAACGGTTTTTTTCTTGTTATGCATTGCATATTATGCCTTCTTTGCTCCTTTTCTTGGAAAGGACATCTATGAATATGTTGCTTTTGGTGTTTATTCTGTACTGGCACTCTCTGTATTCCTTCTCTATGTTCGATGCACTGCCATTGACCCCGCTGATATGGGAGTAGTGCTTGATTGTGACAAAACTTCTAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCCAACAAGATAGGACTAAAGGATGAAGGATTGTCTGATCAGCACAATTCGAATGGGTGCTCCAAAATCGGGTGTTTCTTGTGTAGTTGCCTTGCTATAGAAGATTGCCGTAGTGATGAAGATTTTATTCTACAGCAACAATCTGGCGAGGAGGATGCTTTGTTCTGTACTTTATGCAATGCTGAGGTTCGAAAGTTCAGTAAGCATTGTAGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGCCGGTGGTTGAACAATTGTGTTGGAAGGAAGAATTACATCTCGTTTGTGTGTCTAATGGCGGTGAGCCTGCTTTGGCTTGTAGTTGAATGCGGAGTTGGGATTCTCGTGCTTGTTCGATGCTTTGCTGCTAAGAAGGATACAGAGTATCTGATAGCTGAAAAGCTTGGAGCTGGATTCACCCGAGCCCCTTTTGCTACAATAGTGGCCATATGCACAGCAGTTTCTTTACTTGCGATTATACCACTGGGAGAATTATTCTTTTTTCATATGATCCTGATCCGAAAGGGTATTACAACGTATGAGTATGTTGTTGCCATGAGAACTATGACTGAACCACCCGGTCCTTCAGTTGACGCGGGTGAACAGCAGAGTCTACCTTCATCTCCTACTAGTTCAGCTGTCACTGCGATAAGCGGAAGAAGCTCTGTCGGAATGAGTTTGCAAATCAAAGGTGCCTGGTGTACACCTCCGAGAATCTTTATGGATCACCAGGATGAAATGATACATCAATTGGAGCCAGGCCGTCTACCATCTACTATGGATCCAGATGCAATACAACCTGACAAAGGAAAAAAGTTGAACCAGCGCCCAGTGAGAATAAGCGCATGGAAACTTGCAAAATTAGATTCCAACGATGCAGCTAAGGCATTAGCTAAAGCTAGAGCATCATCATCTGTGCTTCGTCCAATTAGTTCTCGATCACATGCATATGATGCAGATCATTTATCAAGTAGCAATGTGAGTGGAAGAAGCACCCCAAATAGCAACCAAGGATTTCATAACAAATATGATGCAGCCGGGACATCAAGGCTATCTCCTTCCAAGAGCTCATACCCTCCCAGTCAAGCAAGCAGGGAAGATTCAGATGCATGTCACCACAGTATGAGTAACTTCAGCAGTCCACAAGTCTCCAACTTAACTCCTTCCCCAATGCAGAGGCCAGGTTTGAACCGAGACCATTTCAACCCCATGTATCAGCAGCCATCTCAAAATCCTTCTCCTTCATCAGCTGTAGGAAGCCATGGGAATGTAAATCTAGTTCAAGAAAATGGTGCTCGTGTGCCAATGAGAAATAACAACCTCGCTGTTTCAGAGAATAGAAGCTCGTCAGTGTTTTGGGATCAAGCAGCGGGCCGCTTTGTCCCGAACACATCTAGAGCTCAAGGCAGTTCTCAGGTTCCTGGAACAGAGTTAACGTACACTGGTCGCTCTATATTTTTTGGCAGCCCGGCTCTGAGTGAACAACAGTCAAATGCCAGAACAAGAAATAATAGCTCAGTCGCCGGTGTTTTGGACAGAGATAATACAGCAAGGGATTTTCAGCAAGGTAGATCACAAAGAGGTGCGCAGCTTCCGGTGTTTGTTCCCGGTTATTCGCAGCAAAACAAGTTCTCATAG 1932 0.4425 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIYEYVAFGVYSVLALSVFLLYVRCTAIDPADMGVVLDCDKTSKNRSKLDEELAEPNKIGLKDEGLSDQHNSNGCSKIGCFLCSCLAIEDCRSDEDFILQQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLLWLVVECGVGILVLVRCFAAKKDTEYLIAEKLGAGFTRAPFATIVAICTAVSLLAIIPLGELFFFHMILIRKGITTYEYVVAMRTMTEPPGPSVDAGEQQSLPSSPTSSAVTAISGRSSVGMSLQIKGAWCTPPRIFMDHQDEMIHQLEPGRLPSTMDPDAIQPDKGKKLNQRPVRISAWKLAKLDSNDAAKALAKARASSSVLRPISSRSHAYDADHLSSSNVSGRSTPNSNQGFHNKYDAAGTSRLSPSKSSYPPSQASREDSDACHHSMSNFSSPQVSNLTPSPMQRPGLNRDHFNPMYQQPSQNPSPSSAVGSHGNVNLVQENGARVPMRNNNLAVSENRSSSVFWDQAAGRFVPNTSRAQGSSQVPGTELTYTGRSIFFGSPALSEQQSNARTRNNSSVAGVLDRDNTARDFQQGRSQRGAQLPVFVPGYSQQNKFS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00796 643 MobiDBLite consensus disorder prediction 415 521 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 415 462 - -
Vivi3g00796 643 ProSiteProfiles DHHC domain profile. 148 198 - -
Vivi3g00796 643 Pfam DHHC palmitoyltransferase 146 282 IPR001594 GO:0016409
Vivi3g00796 643 MobiDBLite consensus disorder prediction 351 372 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 589 643 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 291 313 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 500 521 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 471 490 - -
Vivi3g00796 643 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 285 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 298 313 - -
Vivi3g00796 643 MobiDBLite consensus disorder prediction 589 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00796 Vivi-Chr3 13011823 13017883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00796 125 279 Lipid Metabolism Gene Families AT4G22750 28.302 1.37e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00796 K20027 - gmx:100818808 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00796 3 13011823 13017883 Vivi3g00796 3 13011823 13017883 ECH