Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00696 ATGGAAGAAATGATGGAAGTAGAAATAATGAAAAAACAGAATTCTCCATCATTTTCAACTCCACCACAACTTCAAATTAATCATCAAATACATTCTCCTAATTCAATGAGTTTTTCTAAAAGCCCTTTTGGTTCTCGTTTTATGAACACTCCTATAGCAAGTCCCATGAAGAAAGCCATTGAAAACATGTTTGAAGAAGTTGGTCAATTCACCAAATTTGACCCACAAGATGATTGGCTTCCAATCACTGCTTGTAGAGAAGGAAATGCTTATTATGCAGCTTTTCATCTTCTTTGTTCTGGAATTGGATTTCAAGCACTTGTTCTTCCTTTAGCTTTTACCACACTAGGCTGGACTTGGGGAATTTTATGTCTATGTGTGGCTTTCACATGGCAGTTATACACTTTATGGTTATTGATTCAGCTTCATGAATCAGACTTAGGGGTACGTCATAGCAGGTACCTCAAGCTTGCTATGGCAGCATTTGGAGAAAAGCTAGGGAAAATATTGGTACTTTTCCCAGTCCAGTATTTATCCGGTGGAACATGTGTGACACTGATTATGATTGGAGGTGGCACAATGAAGATATTCTTCCAGATTCTGTGTGGAGATTCATGCAGCTTATACCAACTCAAAACCATAGAGTGGTATTTGGTATTCACTGTGGCTGCCATTTTGCTTGCTCAGCTTCCAAATCTTAATTCATTTGCAGGGGTTTCTCTCATAGGAGCTATCACTGCTGTAGGTTATTGTTCTATAATATGGATTGTGTCTTTACTCCAAGGTAGAATTGTTAATGTGTCATATGAGTCACCAATGGGACAATCACAAGCTACTAGGATTTTTAGTGTATTGAATGCACTTGGAATCATTGCTTTTGCTTTTAGAGGTCACAATCTTGTGTTGGAAATACAGGGAACCATACGTTCTGAGTCAAAGAATCCATCACGTTTGGCAATGTGGAAAGGAGTTATGTTTGCTTATCTAGTCATTGCCTTTTGTTTGTTTCCTTTAGCCATTGGAGGCTATTGGTCCTATGGAAATTTAATACCTTCAAATGGAGGAATGCTAAGTGCTTTGCAGCAATACCATGAACATGATACATCAAAGTTTATCATTGCTTTGACAAGTTTACTGGTTGTCATCAACAGCCTCAGTTCCTTCCAAATTTATGCAATGCCAATACTTGACAATCTAGAATTCAGATATATCAGCAAAAGGAACAAACCTTGTCCGAGGACGCTGCGAATAGTCTTCAGAAGTCTCTTCGGCTGCCTCACATTTTTTATTTCCGTAGCATTACCGTTCTTGCCAAGTTTGGCAGGGCTCATTGGAGGCATTGCCCTACCAATAACCTTAGCTTATCCCTGTTTCATGTGGATACTGATTAAGAAACCAAAAAGGTTTAGCACAAGTTGGTACCTAAACTCGATGCTTGGGGCAGTAGGGGTGGTTCTAAGTGTACTGGTTGTAACAGGAGCCATTTGGAGCATGGTAGCACTGGGCATTCAGATCCACTTCTTCAATCCATAG 1533 0.3947 MEEMMEVEIMKKQNSPSFSTPPQLQINHQIHSPNSMSFSKSPFGSRFMNTPIASPMKKAIENMFEEVGQFTKFDPQDDWLPITACREGNAYYAAFHLLCSGIGFQALVLPLAFTTLGWTWGILCLCVAFTWQLYTLWLLIQLHESDLGVRHSRYLKLAMAAFGEKLGKILVLFPVQYLSGGTCVTLIMIGGGTMKIFFQILCGDSCSLYQLKTIEWYLVFTVAAILLAQLPNLNSFAGVSLIGAITAVGYCSIIWIVSLLQGRIVNVSYESPMGQSQATRIFSVLNALGIIAFAFRGHNLVLEIQGTIRSESKNPSRLAMWKGVMFAYLVIAFCLFPLAIGGYWSYGNLIPSNGGMLSALQQYHEHDTSKFIIALTSLLVVINSLSSFQIYAMPILDNLEFRYISKRNKPCPRTLRIVFRSLFGCLTFFISVALPFLPSLAGLIGGIALPITLAYPCFMWILIKKPKRFSTSWYLNSMLGAVGVVLSVLVVTGAIWSMVALGIQIHFFNP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00696 510 Pfam Transmembrane amino acid transporter protein 88 499 IPR013057 -
Vivi3g00696 510 PANTHER OS05G0424000 PROTEIN-RELATED 90 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00696 Vivi-Chr3 11577106 11581337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00696 1 510 Organic Solute Cotransporters AT1G47670 54.247 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00696 K26385 - gmx:100788860 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00696 3 11577106 11581337 Vivi3g00696 3 11577106 11581337 ECH