Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00665 ATGGACTCCCTCTCTCTCTTCTGCACCGGAGCCCTTCTCGCCGGCGGCCTTTATTGGTTCGTCTGTGTCCTCGGCCCCGCCGAACGAAAAGGCAAACGCGCCACCGATCTATCCGGTGGTTCAATCTCCGCCGAGAAAGTCCAAGACAGCTACAAACAATACTGGTCCTTCTTCCGCCGTCCCAAAGAGATCGAAACCGCAGAGAAAGTCCCAGATTTCGTTGATACCTTTTACAATTTAGTTACAGATATTTACGAATGGGGCTGGGGACAATCCTTCCATTTCTCACCTTCCATCCCTGGTAAATCCCACCGTGACGCCACGCGCCTCCATGAAGAAATGGCTGTGGATCTCATCGAGGTGAAACCCGGAAACAAAATCCTCGACGTTGGATGCGGTGTTGGTGGTCCCATGAGAGCCATCGCGTCTCACTCACGCGCTAACGTAGTCGGAATCACGATCAACGAGTATCAAGTGAAAAGAGCGAAGCTACACAACAAAAAAGCGGGTCTCGATTCTCTATGCGACGTCGTTTGTGGTAATTTCCTCGAGATGCCGTTTCCCGATAACAGTTTCGACGGCGCGTACTCAATCGAAGCGACGTGCCACGCGCCGAAGCTTGAAGAAGTTTACGCTGAGATTTTTAGGGTTTTGAAACCCGGTGCTCTTTACGTTTCATATGAATGGGTCACAACAGAGAAATTCGTAGCGGAAAATTCTGAACATGTTGAGATTATTCAAGGAATTGAAAGAGGTGACGCTTTGCCTGGGCTTAGAAGCTACGCTGATATAGCTGAAACGGCTAAGAAAGTAGGGTTTGAGGTTGTGAAGGAACGGGATCTGGCTCAGCCACCGGCTGAGCCGTGGTGGAGCCGGTTGAAAATGGGTCGGCTTGCTTATTGGCGTAACCATGTTGTGGTAACTGTTCTGTCTGCATTGGGAATAGCGCCTAAAGGGACCGTTGATGTTCATGAGATGCTGTTCAAGACTGCTGACTTTTTGACCAGAGGGGGTGATACTGGAATTTTCTCTCCTATGCATATGATTCTCTGCAGAAAACCTAAAGAATCAGAGAAATGA 1080 0.4935 MDSLSLFCTGALLAGGLYWFVCVLGPAERKGKRATDLSGGSISAEKVQDSYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEVKPGNKILDVGCGVGGPMRAIASHSRANVVGITINEYQVKRAKLHNKKAGLDSLCDVVCGNFLEMPFPDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKFVAENSEHVEIIQGIERGDALPGLRSYADIAETAKKVGFEVVKERDLAQPPAEPWWSRLKMGRLAYWRNHVVVTVLSALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPKESEK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00665 359 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Vivi3g00665 359 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Vivi3g00665 359 PANTHER - 1 357 - -
Vivi3g00665 359 CDD AdoMet_MTases 126 230 - -
Vivi3g00665 359 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Vivi3g00665 359 FunFam Methyltransferase 44 305 - -
Vivi3g00665 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Vivi3g00665 359 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00665 Vivi-Chr3 11056982 11058411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00665 116 280 Acyl Lipid Metabolism Gene Families AT1G73600 28.485 1.39e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00665 K08242 - gmx:100804517 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00665 3 11056982 11058411 Vivi3g00665 3 11056982 11058411 ECH