Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00660 ATGGCGAAAGCAAAGTTACGTTCTCAGGGGAAGAAACTATCGACGGTTACGCTGATTTTCTGGACTCTTTTCATGCTTACACTAGTCATTATCTTCCTCCTTGCGCTCGGAATCGTTTATCTTCCGAATACAAGCGACGATTCTTCTTCAACCACAGATCTCAGTTCCTTCAGACGCAAAACCTCTGAAAGTTTGGCGGAAAGGAAGGAGCAGTGGACTGAGATTCTGTCTTGGGAGCCAAGAGCTTTCATCTATCACAATTTTCTGTCAAAAGAAGAGTGTGAGTACATGATCAATCTTGCCAAGCCTTTCATGGAAAAATCAAGTGTTGTTGATAGCACGACAGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTTTGAAGAGAGGAAAGGACAAAACTATCCAGAATATTGAAAAAAGAATTGCGGACTTTACCTTCATACCAGTAGAGAATGGAGAGGGACTTCAGGTTCTTCACTATGGAGTTGGGGAGAAATATGAGCCTCATTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGAGTTGCTACAGTTCTTATGTATCTGTCTGATGTTGAAGAAGGCGGCGAGACCGTATTTCCTGCTGCTAAGGCCAACTTTAGCTCTGTGCCATGGTGGAATGATTTATCTGAATGTGCTAAAAAGGGTCTATCAGTGAAACCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGGCCAGATGCCACACTAGATGCATCTAGTTTACACGGTGGTTGCCCGGTAATTAAAGGAAATAAATGGTCTTCAACAAAGTGGATGCATCTTGAGGAGTACAAAGTTTAA 855 0.4246 MAKAKLRSQGKKLSTVTLIFWTLFMLTLVIIFLLALGIVYLPNTSDDSSSTTDLSSFRRKTSESLAERKEQWTEILSWEPRAFIYHNFLSKEECEYMINLAKPFMEKSSVVDSTTGKSTESRVRTSSGMFLKRGKDKTIQNIEKRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECAKKGLSVKPKMGDALLFWSMRPDATLDASSLHGGCPVIKGNKWSSTKWMHLEEYKV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00660 284 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 55 279 IPR045054 -
Vivi3g00660 284 Pfam 2OG-Fe(II) oxygenase superfamily 160 278 IPR044862 -
Vivi3g00660 284 SMART p4hc 80 278 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vivi3g00660 284 FunFam Prolyl 4-hydroxylase 4 72 279 - -
Vivi3g00660 284 Gene3D q2cbj1_9rhob like domain 44 279 - -
Vivi3g00660 284 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 279 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00660 Vivi-Chr3 11015014 11018796 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00660 K00472 - gmx:100818586 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00660 3 11015014 11018796 Vivi3g00660 3 11015014 11018796 ECH