Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00652 ATGAAGATGGAGATGAAGCATGGAACTGAAACTGTGGTGGTTAATAATGGTAATTTTGTGGAAGAAGAAGAAGAACGTAAATTCTCACATCTTCTTGCTTCAAAGGATCGTGATTTTCTTCTATCACCAACTGGAGCTCAGGTAAAAGTTTCAGAACTTGAAGGAAAAGTAGTGGGACTATTATTCGCTGCCAACTGGTACCCACCATGCCGTGGATTCACCCAATTGCTCATTGGAATATACCAACAACTCAAAACAAACATCCCTCACTTTGAAATAGTCTATGTATCTTCTGATGAAGACTTAGATGCTTTTAATGGATTCTACCAAACCATGCCATGGCTTGCTGTTCCTTTCTCTGATTTAGAAACAAAGAAAGCGTTGAACCGAAAATACGACGTCGAAGGTATTCCATGTTTGGTTATGTTGCAACCTGATGATAGTAAAGGCGAAGCAACACTTCGTGATGGTGTCGAGCTTGTTTATCGATATGGTGTTCAAGCTTTTCCGTTTAGTAAAGAGAGGTTGGAGGAATTGCATGAGGCTGAGAGAGAGAAGCTTGAGAATCAGACTCTAGCTAATTTGCTAGGAAATAATCATAGAGATTATGTTTTGAGTCATACAAATGGATTACTCACACAGGTACCTGTTGCTTCTTTAGTAGGCAAAACTATTGGACTATACTTCTCAGCTGGATGGTGTGTCCCATGCACCAAATTCACTCCCAAATTGATATCTGTTTATCAGAAAATCAAGCAAGAGATAGCTAAGAAAGAAGATAATGAAGAAGGTTTCGAAATTGTGCTTGCATCGAACGATCGCGACCAAGAATCTTTCGACTCTTACTACAACATCATGCCTTGGTTAGCATTACCTTTTGGTGACCCAGAGATAAAGAACCTTGCAAGACATTTTGACATACAAGGGATACCTTGTTTGGTAATTATAGGTCCTAATGGTAAAACAATAACAATACATGGAAGAAACTTGATAAATTTGTACCAAGAAAATGCTTACCCTTTCACTGCTACCAAAGTGGAGCAGCTAGAGAAACAGCTTGAAGAAGAGGCTAAGGATCTACCAAATTTGGTGCATCATGAAGGGCACCATCATGGACTTAATTTAGTGTCTGATGGAAATGGTGGAGGACCCTTTATTTGTTGTGTTTGTGATGAACAAGGGTCCAATTGGGCTTATCAGTGTCTTCAATGTGGCTATGAAGTGCACCCAAAGTGTGTCACAACTGTGCATGGGACGTGA 1260 0.3984 MKMEMKHGTETVVVNNGNFVEEEEERKFSHLLASKDRDFLLSPTGAQVKVSELEGKVVGLLFAANWYPPCRGFTQLLIGIYQQLKTNIPHFEIVYVSSDEDLDAFNGFYQTMPWLAVPFSDLETKKALNRKYDVEGIPCLVMLQPDDSKGEATLRDGVELVYRYGVQAFPFSKERLEELHEAEREKLENQTLANLLGNNHRDYVLSHTNGLLTQVPVASLVGKTIGLYFSAGWCVPCTKFTPKLISVYQKIKQEIAKKEDNEEGFEIVLASNDRDQESFDSYYNIMPWLALPFGDPEIKNLARHFDIQGIPCLVIIGPNGKTITIHGRNLINLYQENAYPFTATKVEQLEKQLEEEAKDLPNLVHHEGHHHGLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCVTTVHGT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00652 419 SUPERFAMILY Thioredoxin-like 205 326 IPR036249 -
Vivi3g00652 419 Gene3D Glutaredoxin 201 343 - -
Vivi3g00652 419 Gene3D Glutaredoxin 31 173 - -
Vivi3g00652 419 SUPERFAMILY Cysteine-rich domain 357 414 IPR046349 -
Vivi3g00652 419 ProSiteProfiles Thioredoxin domain profile. 30 181 IPR013766 -
Vivi3g00652 419 Coils Coil 346 366 - -
Vivi3g00652 419 ProSiteProfiles Thioredoxin domain profile. 194 358 IPR013766 -
Vivi3g00652 419 CDD C1 387 417 - -
Vivi3g00652 419 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 368 419 IPR002219 -
Vivi3g00652 419 Pfam C1 domain 368 413 IPR004146 -
Vivi3g00652 419 PANTHER THIOREDOXIN 21 397 - -
Vivi3g00652 419 SUPERFAMILY Thioredoxin-like 41 146 IPR036249 -
Vivi3g00652 419 Coils Coil 173 193 - -
Vivi3g00652 419 Pfam Thioredoxin-like 55 146 IPR012336 -
Vivi3g00652 419 Pfam Thioredoxin-like 222 321 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00652 Vivi-Chr3 10975295 10978727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00652 K17609 - gmx:100815038 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00652 3 10975295 10978727 Vivi3g00652 3 10975295 10978727 ECH