Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00422 ATGGGTGTCATCACTGCCCAGTGTTACTGTTTCACCGCCGTTGGATCATCAAAACCCTACCTTTCTCCCTCATCTCACAATCTCCGCCATTCCCTTCCAATTTCTCTTTCTTCTTCTTCTTCTTCACCATTCCCACTCAGACCAATATCATGCAGTGCCTCTTCCGCTCCCGCCGCCGAATCTCCTCTCACCGCGAAAGTTGGAACTGGGTTGAAGGATTTTATTCACATAGATGATTTTGACAAGGAAACTATTTTGAAGATATTGGACCGAGCTATTGAGGTGAAGACATTGTTGAAATCAGGGGACAGGACTTTTCGGCCTTTTGAAGGGAAGACAATGTCAATGATATTTGCTAAGCCATCCATGAGAACAAGGGTTTCTTTTGAGACTGGTTTTTCATTGTTAGGTGGTCATGCTATTTACTTAGGACCTGATGATATTCAAATGGGGAAGCGGGAGGAGACTCGTGATGTTGCTCGAGTTTTGTCTCGATATAATGATATCATTATGGCTCGGGTTTTTTCTCATCAGGACATACTTGATCTTGCAAAGTATGCAACTGTCCCTGTCATCAATGGTTTGACAGACTACAACCATCCCGTTCAGATAATGGCTGATGCCCTTACTATGATAGAGCACATTGGTCGGTTTGAAGGAACCAAGGTTGTCTACGTTGGAGACGGAAATAATATTGTCCACTCATGGTTGTTGTTGGCAGCTGTAGTTCCTTTTCACTTTGTTTGTGCATGTCCAAAAGGTTTTGAACCTGATGCGAAAACAGTTGAGAAGGCAAGGAAGGCTGGAATCAGCAAGATTGAGATAAGTCATGATCCCATAGAAGCTGTTAAAGGAGCTGATGTTGTGTATTCAGATGTCTGGGCCAGCATGGGCCAAAAGGAAGAAGCTGCATATCGTCGTGAAGTGTTTAAAGGATTTCAGGTGGATCAAAATCTGATGGATGCGGCTGGTTCAAAGGCATTTTTTATGCACTGCTTACCTGCTGAAAGAGGGGTGGAGGTGACTAACGAAGTTGTTGAAGCTCCATATTCGATAGTCTTCCCTCAAGCTGAGAACCGAATGCATGCACAGAATGCTATAATGCTCCATGTACTTGGCAAGTAA 1125 0.4382 MGVITAQCYCFTAVGSSKPYLSPSSHNLRHSLPISLSSSSSSPFPLRPISCSASSAPAAESPLTAKVGTGLKDFIHIDDFDKETILKILDRAIEVKTLLKSGDRTFRPFEGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFSHQDILDLAKYATVPVINGLTDYNHPVQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLLAAVVPFHFVCACPKGFEPDAKTVEKARKAGISKIEISHDPIEAVKGADVVYSDVWASMGQKEEAAYRREVFKGFQVDQNLMDAAGSKAFFMHCLPAERGVEVTNEVVEAPYSIVFPQAENRMHAQNAIMLHVLGK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00422 374 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 71 373 IPR024904 GO:0004585|GO:0006591
Vivi3g00422 374 PRINTS Ornithine carbamoyltransferase signature 116 130 IPR002292 GO:0016743
Vivi3g00422 374 PRINTS Ornithine carbamoyltransferase signature 189 203 IPR002292 GO:0016743
Vivi3g00422 374 PRINTS Ornithine carbamoyltransferase signature 289 299 IPR002292 GO:0016743
Vivi3g00422 374 PRINTS Ornithine carbamoyltransferase signature 351 362 IPR002292 GO:0016743
Vivi3g00422 374 PRINTS Ornithine carbamoyltransferase signature 149 162 IPR002292 GO:0016743
Vivi3g00422 374 FunFam Ornithine carbamoyltransferase 208 359 - -
Vivi3g00422 374 Gene3D Aspartate/ornithine carbamoyltransferase 203 368 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 NCBIfam ornithine carbamoyltransferase 72 372 IPR002292 GO:0016743
Vivi3g00422 374 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 71 373 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 72 213 IPR006132 GO:0006520|GO:0016743
Vivi3g00422 374 FunFam ornithine carbamoyltransferase, chloroplastic 72 207 - -
Vivi3g00422 374 Gene3D Aspartate/ornithine carbamoyltransferase 72 202 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 118 137 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 337 360 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 200 211 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 325 334 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vivi3g00422 374 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 71 374 - -
Vivi3g00422 374 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 219 370 IPR006131 GO:0006520|GO:0016597|GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00422 Vivi-Chr3 7336375 7338807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00422 K00611 - gmx:100775828 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00422 3 7336375 7338807 Vivi3g00422 3 7336375 7338807 ECH