Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00421 ATGGGAACCCTTGGAAGAGCCATATACACCGTTGGGTCGTGGATTCGAGGTACCGGACAGGCCATTGATCGCCTCGGTTCCCGCTTCCACGGCGGCTATTACATCGAAGAGCAGCTGTCTAGACATCGAACTCTGCTGAATATCTTTGACAAGGCTCCTGTTCTTGATAAGGATGTGTTTGTTGCACCTAGTGCCGCCGTTATCGGAGATGTGCAGATTGGAAAGGGGTCGTCGGTTTGGTATGGATCTGTATTGAGAGGTGATGTTAACAGCATCAGAGTTGGAAGTGGAACTAACATACAGGATAACTCCCTGGTGCATGTTGCAAAGACAAACCTAGGTGGGAAGGTGTTGCCTACTATAATTGGGGATAATGTTACTGTAGGTCACAGTGCTGTTTTACATGGCTGTACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTACTCGATGGTGTAGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTGAGGCAGAACACAAAGATTCCATCTGGCGAGGTTTGGGCAGGCAATCCAGCCAAGTTTCTGAGAAAGCTCACCAATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAGGTCCATGCAGCTGAAAATTCGAAGTCCTATGATGAAATTGCGTTTGAGAAGGTGCTGCGTAAGAAGTATGCAACTAAAGATGAGGAATACGACTCTATGTTGGGTGTTGTTCGTGAGATCCCACCAGAACTTATTCTTCCTGATAATATCTTGCCTGATAAAGCAAACAAAGCTCTTCAAAATTGA 822 0.4599 MGTLGRAIYTVGSWIRGTGQAIDRLGSRFHGGYYIEEQLSRHRTLLNIFDKAPVLDKDVFVAPSAAVIGDVQIGKGSSVWYGSVLRGDVNSIRVGSGTNIQDNSLVHVAKTNLGGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTKIPSGEVWAGNPAKFLRKLTNEEIAFISQSATNYTNLAQVHAAENSKSYDEIAFEKVLRKKYATKDEEYDSMLGVVREIPPELILPDNILPDKANKALQN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00421 273 CDD LbH_gamma_CA_like 54 212 IPR047324 -
Vivi3g00421 273 Gene3D Hexapeptide repeat proteins 44 223 - -
Vivi3g00421 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
Vivi3g00421 273 PANTHER DYNACTIN SUBUNIT P25 10 239 - -
Vivi3g00421 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Vivi3g00421 273 FunFam Carnitine operon protein CaiE 44 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00421 Vivi-Chr3 7327252 7331240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00421 K01726 - gmx:100777972 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00421 3 7327252 7331240 Vivi3g00421 3 7327252 7331240 ECH