Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00408 ATGCAAGGGATTTACCGGATACTGAAACCTCGCTGCAACCCTAGAAGGGCTGCGATATTTCAACAATTCCACGGGAATGGAATCTTTAACCTGAACAAAATATCTTCAGGGTTTGGATTTATCACATCCTCTCCATCCATGCAGCAGAAAGGGTTGGAGAATGTGACAGTGTCAGAGGTGCTAATGACAAAGGGGGAAGAAAAAGTGGGTTCCTGGCTTTGGTGTAGAGTTGATGATGTTGTTATTAATGCAATGAGGAATATGGCTGAAAATGATATTGGATCATTGGTGGTACTGAAGCAAGAGGGCCAGGACATAGCTGGCATTGTCACAGAACGAGATTGCTTAAAGAAAATAGTTGCACAAGGAAGATCACCGTTATACACACGAGTCGGTCAAATAATGACTAATGAGAATGACCTGGTAACTGTGACCTCCGACACAAACATTCTAAGAGCAATGAGACTAATGTTAGATAATCGCATTCGGCATGTTCCAGTTATAGATGGGAAAATAGTTGGTATGATTTCAATTGTAGATGTTGTGCGAGCTGTGACAGAGCAACAAGATGGAGAATTGAAGAGACTCGGTGATTATATTAGAGGAGAATACTACTAA 618 0.4142 MQGIYRILKPRCNPRRAAIFQQFHGNGIFNLNKISSGFGFITSSPSMQQKGLENVTVSEVLMTKGEEKVGSWLWCRVDDVVINAMRNMAENDIGSLVVLKQEGQDIAGIVTERDCLKKIVAQGRSPLYTRVGQIMTNENDLVTVTSDTNILRAMRLMLDNRIRHVPVIDGKIVGMISIVDVVRAVTEQQDGELKRLGDYIRGEYY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00408 205 CDD CBS_pair_bac_euk 75 183 IPR044725 -
Vivi3g00408 205 Gene3D - 50 204 IPR046342 -
Vivi3g00408 205 ProSiteProfiles CBS domain profile. 135 191 IPR000644 -
Vivi3g00408 205 ProSiteProfiles CBS domain profile. 62 127 IPR000644 -
Vivi3g00408 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 27 204 - -
Vivi3g00408 205 SUPERFAMILY CBS-domain pair 54 191 IPR046342 -
Vivi3g00408 205 SMART cbs_1 140 186 IPR000644 -
Vivi3g00408 205 SMART cbs_1 71 120 IPR000644 -
Vivi3g00408 205 Pfam CBS domain 131 185 IPR000644 -
Vivi3g00408 205 Pfam CBS domain 73 120 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00408 Vivi-Chr3 7032265 7033912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00408 - - gmx:100778020 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00408 3 7032265 7033912 Vivi3g00408 3 7032265 7033912 ECH