Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00398 ATGCGAATTCCTAAGAGGCTATTCTCATTTTCTCTTTCTTACTTCTCTCCTCGGCTCGTAGCGCCTCTTTTATCTTCTCGGATTTGTTTTGCGTTTGGAATTTGCGGTAAAGCTTCTCGTAGCTTCGTCAATATTGCATCACCAGGTGCTAGCAAGGTGCATTCTCAATATTCAATGGATGAGAACCACGATGTTGGTCTGCATGACTCAAAATCAATTGGCAGAAATAGTGAAAAACAGCCACATGTATGGTCATCTTCTCCTGAACATGGATCTAGAACTGATATAGGCAAACAAATATTTTGTAACCGGTCACTAAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAATACAAGCCTGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTATGATTTGGGATATCCTAGTGAGTTGCTAAATTGGTCTTTTAATTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGAAATATATTGAAGATGGATCGCCACAAATATGTGAAAGTAGCTTATCATGGATTTAGAGAATTGTCAAAAGAAGATAAAGTTGGGACCTACGGTAATACTTTAATACGCGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTCTCTCTCGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGTAATCCTGGAAAGATTCGAGAGGGTGTCGATTATGCTCGCATGTATAAAGATGTACGAGCTGCTGTTGACTTGTGCCACCGTGATGGGACATTGAAGCAAATGGTGGCTAAAGATCCTGGAAGATATATCAATGAAGACACCATGATAGTGCCGATGCTTGAAATGCTCAGAGAATCTGGACGTGCAACATTTTTAGTGACAAATAGTTTATGGGACTATACAAATACTGTCATGAATTTCCTCTGTGGATCCAGACAGGTAGATGGCAGTAACAATTTTGAATGGCTTCAATACTTTGACGTGGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCTCGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTTCTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCTGCAAGGATATTCACAGAATCAAAGAATCACGCTTGCCAAGCTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTTCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTATGGAGACATACTACGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCAGAGCTGGAGAAGGAAGTTAAACTCCTCTGGGAGTCAAGGGACACCCGAAAGGAAGAACTTTACTTGAATAGTCTCATGCAGGAGCTTCAATTCTTGAGGAGTGAGCGTGATCGCATTGAGGATGAAGTACATCATTTGAAGTGGTCTCTCAAATTCAAGAACCCAGATGCTGTTGCCAAGCAAAAGTTATCTTCAGCACTTAATAAATTGGAGCTTGAAAGAGAGAGAATGCGGTTAATCCATCAAGAAGCTCAAAGAAAATTACATCTAGGGTTTCACGAACCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACCTGGCGTTGCACTCTCCAGATAAGTATTACAGACCTAGTGAAGATTTTATGCAGCATGAATTTGGAATTCTCGGTTCTGAGTCACGAGAAATATAA 1821 0.408 MRIPKRLFSFSLSYFSPRLVAPLLSSRICFAFGICGKASRSFVNIASPGASKVHSQYSMDENHDVGLHDSKSIGRNSEKQPHVWSSSPEHGSRTDIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLIRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDTMIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSRQVDGSNNFEWLQYFDVVITGSAKPGFFLEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTESKNHACQAFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKEELYLNSLMQELQFLRSERDRIEDEVHHLKWSLKFKNPDAVAKQKLSSALNKLELERERMRLIHQEAQRKLHLGFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILGSESREI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00398 606 Coils Coil 471 491 - -
Vivi3g00398 606 NCBIfam HAD-IG family 5'-nucleotidase 100 467 IPR008380 -
Vivi3g00398 606 Pfam 5' nucleotidase family 100 596 IPR008380 -
Vivi3g00398 606 MobiDBLite consensus disorder prediction 77 95 - -
Vivi3g00398 606 Coils Coil 509 536 - -
Vivi3g00398 606 CDD HAD_cN-II 101 461 - -
Vivi3g00398 606 Gene3D - 260 478 IPR023214 -
Vivi3g00398 606 Gene3D - 96 146 IPR023214 -
Vivi3g00398 606 MobiDBLite consensus disorder prediction 68 95 - -
Vivi3g00398 606 SUPERFAMILY HAD-like 98 597 IPR036412 -
Vivi3g00398 606 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 90 595 IPR008380 -
Vivi3g00398 606 PIRSF NT5C2 71 605 IPR016695 -
Vivi3g00398 606 FunFam Cytosolic purine 5-nucleotidase 260 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00398 Vivi-Chr3 6883518 6891099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00398 - - vun:114164304 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00398 3 6883518 6891099 Vivi3g00398 3 6883518 6891099 ECH