Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00394 ATGTCTGATCAAGTAAATGGCTTGCAACACAACCAAACATGGCCAGAGCTACAGCTTCCAGACTTGTTACATAGTAATGAGACTGTTCGACAAGTCCATGCAACAATTGAAAAGGAATGGGATTTCCTTCAAAGGTCGGCTTGTCAAACGGCTGCTGGAAGGGCTTTGTGGAAGCATGTGATCCATGATCCACTTGCTGCTTTACTGGCAGGGGAGCATTATTTGAGAAACCTTCATGAAAAGATGATGAAAGACCATCTCAATAATGCTCATGAAACTTCTGGAGTGATCCTTGCAGTTCGAACGCTTTGGTTTGATTCTAGACTTGAAGAATTTCTCAACTCCACTAATGGCAGAGAAGCACAGGTTGTTCTCCTAGGTGCAGGAATGGACACGAGAGCATATCGTTTGAATTGCTTAAAGGACAGTGATGTCTTTGAGGTTGATTTTGCAGAAGTCTTGGAGGTGAAAAGCACTATTCTGCAAGCAGCTAAGGAATCCATATTTGACTCACAACATAGTATGTCAAAAGCAAAATCACTAACTAGAGTAGCAGCAGACATAAGAGAAAATGATTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTGCCACAAAAGAGCACAGTTTGGATTCTAGAAGGTATCTTGTACTACCTCGCCCAATCCAATGCCATGCAACTGCTGAGGATTTTAGCTAACAATTGTGTCTTAACTCACACAGTCATCATAGCAGACTTCATGAATAAGTCGTCAACCACACTATCCAATTCAGTCTTCCAATTTTACAGTGATTGGCCAGACCAACTTTTGCCATCTATTGGGTTCACTCATGTAAAACTTTCACAAATTGGAGACCCAGATGCTCATTTTGGCCTCTTGAATGATCCGTTAAATCTCTTCAACAAGCTCCGCAGCTTGCCTAGGTCATTACAAACCAATCCAGAGGACGGAGCACCTTGCTGTCGCTTGTACTTAGTGGAAGCTTCTGGTTCACCCGATCAAAATTCTGCGCATAATAAGGAGTCGGTGATTCAGTCCTGA 1041 0.4246 MSDQVNGLQHNQTWPELQLPDLLHSNETVRQVHATIEKEWDFLQRSACQTAAGRALWKHVIHDPLAALLAGEHYLRNLHEKMMKDHLNNAHETSGVILAVRTLWFDSRLEEFLNSTNGREAQVVLLGAGMDTRAYRLNCLKDSDVFEVDFAEVLEVKSTILQAAKESIFDSQHSMSKAKSLTRVAADIRENDWMEKLQIAGFLPQKSTVWILEGILYYLAQSNAMQLLRILANNCVLTHTVIIADFMNKSSTTLSNSVFQFYSDWPDQLLPSIGFTHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLQTNPEDGAPCCRLYLVEASGSPDQNSAHNKESVIQS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00394 346 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 11 311 - -
Vivi3g00394 346 Gene3D Vaccinia Virus protein VP39 37 292 IPR029063 -
Vivi3g00394 346 NCBIfam SAM-dependent methyltransferase 57 249 IPR011610 GO:0008168
Vivi3g00394 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 326 IPR029063 -
Vivi3g00394 346 Pfam Leucine carboxyl methyltransferase 47 230 IPR007213 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00394 Vivi-Chr3 6866684 6868598 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00394 - - gmx:100800317 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00394 3 6866684 6868598 Vivi3g00394 3 6866684 6868598 ECH