Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00370 ATGACCCTTCGCCTAAACGTACTATTTCAGGACATTAATTCCTCACTCATTCACTCACTTCAAATTTCAAACCAAACCCCACATTCACACAATTTCAAAAAATTAAATCCAATAATACCCAAAATGCCCATTGCAACAAAGCTCCACGTTCGTTCTAATTCTAAACCGCGAGCGATTTTGAAACCAGGTGGAAACATAGTTCCGGTTCATGAAGAAACAACGAAAGTTACGAAACACAACAAGAAGAAAACACAGGGTCCAAGAAAACAAGTGACGGAAATCTCTGACTCTGATGTTGTTGTCGGAAGTAACGTGTGTTTGGATTTAGACAGCACATGTTCCTCGGATTCCTCTTCTGTCAAAAAGGTCAACTCTGTGAATGGAAATGGAATTTCAAAGATGAAGCGCAACAACGGGTTTAAGCCACCGCCGGTGAGAGATGCTGCCCACGTGTCTCCGCCTTGTAAGGGTGAGCCACCGTCCAAGACATGCGATTGGATCACACCAAATTCAGACCCTATTTATACTGCTTTCCATGACGAAGAATGGGGTGTTCCAGTTATTGATGATGATACAAAGCTATTTGAGCTTCTAATATTTTCACAAGCACTAGCAGAACACACTTGGCCAACCATTCTTAACCACAGAAACATATTCAGGAAATTTTTCGAAAATTTTGATCCATCCTCAATTGCACAGTTTAATGAGAAGAAGTTGCTAACACCCAAAATAAATGGCAACCCTTTGTTATCAGAACAAAAGGTCCGCGCCATTATGGAAAACGCTAAACAATTACTTAAGGTTCAGCTCGAGTTTGGTTCATTCAGCAATTATTGTTGGAAATTCGTTAACAACAAACCGATAAAAAATGAATATCGATACGGACGTCAAATACCTGTGAAAACTCCGAAAGCGGATCTCATTAGCAAGGATTTGATGAGAAGAGGTTTCCAATGTGTTGGACCAAAAGTAGTTTATTCATTCATGCAAGTATCAGGGCTAGTTAACAACCATTTATTAACATGCTTCAGGTACCAACAATGCAACGTGAGAATCAAAAATGAAATTAAAACAGAATAG 1080 0.3944 MTLRLNVLFQDINSSLIHSLQISNQTPHSHNFKKLNPIIPKMPIATKLHVRSNSKPRAILKPGGNIVPVHEETTKVTKHNKKKTQGPRKQVTEISDSDVVVGSNVCLDLDSTCSSDSSSVKKVNSVNGNGISKMKRNNGFKPPPVRDAAHVSPPCKGEPPSKTCDWITPNSDPIYTAFHDEEWGVPVIDDDTKLFELLIFSQALAEHTWPTILNHRNIFRKFFENFDPSSIAQFNEKKLLTPKINGNPLLSEQKVRAIMENAKQLLKVQLEFGSFSNYCWKFVNNKPIKNEYRYGRQIPVKTPKADLISKDLMRRGFQCVGPKVVYSFMQVSGLVNNHLLTCFRYQQCNVRIKNEIKTE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00370 359 SUPERFAMILY DNA-glycosylase 163 348 IPR011257 GO:0003824|GO:0006281
Vivi3g00370 359 Gene3D Hypothetical protein; domain 2 161 346 - -
Vivi3g00370 359 PANTHER OS04G0501200 PROTEIN 52 355 - -
Vivi3g00370 359 Pfam Methyladenine glycosylase 170 344 IPR005019 GO:0006284|GO:0008725
Vivi3g00370 359 MobiDBLite consensus disorder prediction 118 163 - -
Vivi3g00370 359 MobiDBLite consensus disorder prediction 118 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00370 Vivi-Chr3 6588705 6593355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00370 K01246 - gmx:100306457 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00370 3 6588705 6593355 Vivi3g00370 3 6588705 6593355 ECH