Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00368 ATGCTTCAAGCAATGGAAAGTTCAGTGAATAATGGTGGATTCTCTCATTTGCAAAGCTGTGGTGGTGATAGTAGTGAAGAAGAGCTATCGGTGCTACCTCGCCATACCAAAGTGGTGGTCACCGGAAACAACCGTACCAAATCGGTGCTCGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGATTAGGTGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTACAAAGGAATGCTCTAAGTGTGATTGAAGCACCAACAGGTAATGAAGAAGATGATGACCTTGAGTTTGACAATGTACCATGGAATGGATCAGATATGGCATCGGACGACACACACAAGTCTCACAAATCGAGGCACAGAATGCATAGATCATTGGGATCATGTCACAAGACAATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCGTTACTATGCCTCATGGGTCCATGAAAGTTGACTTGAGCAAGCTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTTGTGGATGTCGTCCCAAATCCATCGAAAGAGCAGCTACTAGATGTTGTTCAGAGGCATTTCATGTCCCAGCAAATATTGGACGAGTTGCAGGTGATTAAGGGATTTGTCAATGCCGCGAAGAGGCTCAAGACAGTGTGCAAATGA 681 0.4479 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00368 226 MobiDBLite consensus disorder prediction 110 155 - -
Vivi3g00368 226 PANTHER SAP30 23 223 IPR024145 -
Vivi3g00368 226 Gene3D - 140 226 IPR038291 -
Vivi3g00368 226 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 165 219 IPR025718 GO:0005515
Vivi3g00368 226 MobiDBLite consensus disorder prediction 1 28 - -
Vivi3g00368 226 MobiDBLite consensus disorder prediction 133 153 - -
Vivi3g00368 226 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00368 Vivi-Chr3 6559941 6563108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00368 - - gmx:100809195 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00368 3 6559941 6563108 Vivi3g00368 3 6559941 6563108 ECH