Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00347 ATGGGTACGGTAATAGACGACGACGTTTCACCGATCGAGGAGGTTCGCGCGGTGGTATCCACCGACGACGACCCGAACCTCCCGGTATGGACATTTCGAATGTGGACACTGGGGATAATCTCAGTGGTGTTACTCTCTTACTTGAACACATTCTTCAGTTACAGAGCGGAGCCTTTGTCGGTGACGACGATATCGGTGCAAGTAGCCACGCTGCCTATTGGCCGATTCATGGCGAGGGTGTTGCCGGAAAGAAAGTTTCGGATCGTTGGGTTCGGAGCGAGAGAGTTTTCGTTGAACCCGGGTCCTTTCAACGTGAAGGAGCACGTGCTGATTTCTATATTTGCGAATGTTGGTGGAACTGCTTATGCCATTAGTATTATTGATATCATTCGCGCTTTTTATTATCGGAAAATCGCTTTCTTTACGTGTTGGATTCTTGTTATCACTACTCAGGTGTTAGGGTATGGATGGGCGGGGATAATGAAGAAGTATGTGGTGGAGCCGGCGGAGATGTGGTGGCCGTCCACCCTCATACAAGTTTCATTGTTCAGGGCTATACATGAAAAGGATGAAAACCGAATGTCAAAAGGAAAGTTCTTTGTGATAGCACTTGTCTGCAGTTTTGCATGGTACATTGTACCAGGTTACCTATTTGCCACATTATCAGTTATCTCATGGGTTTGTTGGATTTTCCCAAACTCAGTAACAGCTCATCAACTTGGCTCTGGAAGAAATGGCCTTGGCCTCGGCTCATTTTCGCTCGACTGGACCACCATTGCTGCATTCCTCGGAAATCCACTCATCACACCCTTCTTCGCAACCATCAATATCCTTGTTGGCTACATTTTACTAGTTTACATAATCATTCCCGTTGCTTATTGGGGACTAAATGTCTATAATGCCAAAAACTTCCCTATATTCTCCTCTGTATTATTCACCGCTCAAGGTAGTAGATACAATGTCACCGGTATTGTTAACGATAAGTTTGAGATCGATATGAACGCGTATCAGGAGCAAGGTCATATAAATATGAGTATCTTTTTCGCTGTTAGTTATGGGCTTGGATTTGCTGCTATTGTGTCTGCTCTTACTCATGTTGCTATATTTAACGGAAAGGAGATATATCATCAATTTATGTCGTCGCGAACGGGAAAGGAAGATGTTCATACAAGAATGATGAAGAGGTATGAAGATATTCCTGGTTGGTGGTTTCATGCTACGCTTTTGATTTCGTTTGTTCTTGCACTTGTGATGTGTATTTTCTTGAAAGATGAAATACAAATGCCTTGGTGGGCACTCATCTTTGCTTCTGGACTTGCTCTCATGTTCACTCTTCCCATTAGCATCATAACTGCCACCACTAATCAGAGTCCAGGTTTGAATATTATTACCGAATACATTATGGGTGTGATTTCACCTGGCAAACCAATAGCCAATGTATGTTTCAAGACATACGGCTATATAAGCATGGCACAAGCTGTTACATTTCTATCTGATTTCAAGCTTGGACATTACATGAAAGTCCCACCAAGATCAATGTTCATAGTTCAGATCATAGGCACAATCATAGCTGGAACAGTGAACGTCAGTGTTGCATGGTGGTTACTAGGTTCAATAAAAGGCATATGTCACGAAGAGCTACTCCCCGAGGGTAGCCCGTGGACATGCCCGGGCGACAACGTGTTCTTCGACGCATCTGTAATATGGGGTTTAGTCGGCCCAAGACGAATATTCGGCCCGCTAGGTAACTACTCAAAGCTCAACTGGTGGTTCTTGATAGGCCTATCAGGCCCAATAGTTGTATGGGCTTTAACAAAAGCCTTTCCGAATAAAAAATGGATATCACACATTCATTTTCCTGTCTTACTTGGAGCAACTGCAGCTATGCCACCAGCTAGCACAGTGAATTTCAATTCTTGGTTAATGGTTGCAATTACGTTCAACTTTTTTGTGTATACATATCATAAGAAGTGGTGGAAAAGGTACAATTATGTTCTTGCTGCTGCTTTAGATGCTGGATTGGCTTTTGTTACTATTCTTCTTTATTTTACGGTTGCAAATAAGGGAATAACGTTGGACTGGTGGGGACAAGATGAGCATTGTCCTCTTGCTAAGTGTCCTACTGCTAAAGGGATAGAGACTGAAGGTTGTCCTACGTTTTGA 2163 0.4323 MGTVIDDDVSPIEEVRAVVSTDDDPNLPVWTFRMWTLGIISVVLLSYLNTFFSYRAEPLSVTTISVQVATLPIGRFMARVLPERKFRIVGFGAREFSLNPGPFNVKEHVLISIFANVGGTAYAISIIDIIRAFYYRKIAFFTCWILVITTQVLGYGWAGIMKKYVVEPAEMWWPSTLIQVSLFRAIHEKDENRMSKGKFFVIALVCSFAWYIVPGYLFATLSVISWVCWIFPNSVTAHQLGSGRNGLGLGSFSLDWTTIAAFLGNPLITPFFATINILVGYILLVYIIIPVAYWGLNVYNAKNFPIFSSVLFTAQGSRYNVTGIVNDKFEIDMNAYQEQGHINMSIFFAVSYGLGFAAIVSALTHVAIFNGKEIYHQFMSSRTGKEDVHTRMMKRYEDIPGWWFHATLLISFVLALVMCIFLKDEIQMPWWALIFASGLALMFTLPISIITATTNQSPGLNIITEYIMGVISPGKPIANVCFKTYGYISMAQAVTFLSDFKLGHYMKVPPRSMFIVQIIGTIIAGTVNVSVAWWLLGSIKGICHEELLPEGSPWTCPGDNVFFDASVIWGLVGPRRIFGPLGNYSKLNWWFLIGLSGPIVVWALTKAFPNKKWISHIHFPVLLGATAAMPPASTVNFNSWLMVAITFNFFVYTYHKKWWKRYNYVLAAALDAGLAFVTILLYFTVANKGITLDWWGQDEHCPLAKCPTAKGIETEGCPTF 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00347 720 Pfam OPT oligopeptide transporter protein 30 684 IPR004813 GO:0035673
Vivi3g00347 720 NCBIfam small oligopeptide transporter, OPT family 8 688 IPR004648 GO:0055085
Vivi3g00347 720 NCBIfam OPT family oligopeptide transporter 13 684 IPR004813 GO:0035673
Vivi3g00347 720 PANTHER ISP4 LIKE PROTEIN 7 718 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00347 Vivi-Chr3 6172597 6176534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00347 6 720 Organic Solute Cotransporters AT1G09930 68.698 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00347 - - gmx:100785973 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00347 3 6172597 6176534 Vivi3g00347 3 6172597 6176534 ECH