Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00341 ATGCCTATAACTCTTCTATCTCCTCCAAATACCCTTATCTTATTCAACAATTCCACTCTTGTCCCTACACGTATTTCACAATCTCGCCACCGCGCACCCCAACGTTCTTCCCATTCACTTCGCATCTCTTGTTCAACCGCATCTGATATGGATACTTCCTCGGGTCAAGGCATTCTTTATCCATTGCACCGTACTAAAACTCTTCACCTGGTTAGGCATGCCCAAGGGTTTCACAATGTTGAAGGTGACAAGGACCCTAAGGCGTACTTATCTTATGATCTTTTTGATGCAAGCCTGACCCCTCTAGGCTGGAAACAGGTTGATAATCTGAAAGAGCATGTTAAGGGAAGCGGTCTTTCCGAAAGAATTGAACTCGTTATTGTTTCCCCCTTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGGGGAATGCACTGATGTGATTGATGCCACTCCTCTGATGAATCAGAATGTGGGGGATAGCTCTCGTTCTGCAATTTCTAGTCAGAATTCGCCACCATTTACAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAGACATCACTGAGTACAAGAACATGTTTCCAGCAATTGATTTTTCACTGATTGAGTCTGATGACGACATTTTGTGGAAACCTGATATTCGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACTCGTAAAGAAAAAGAGATTGCTGTTGTTACTCACAGTGGTTTTCTATTTCATACTCTAAGTGCTTTTGGAAATGATTGCCATCCAAATGTGAAGAGTGAAATCTGCACACACTTTGCTAATTGTGAGCTGCGTTCAGTGGTTATCATCGATAGAGGGATGATTGGATCAAATGAGTCCTCTACCAACTTTCCTGGCAAGATTCCACACGGCCTTGACCTTCCCAGTGATGTTGCTGACGAGAAACATGCTGCGAATGAGCCAACTAAGTAA 1005 0.4388 MPITLLSPPNTLILFNNSTLVPTRISQSRHRAPQRSSHSLRISCSTASDMDTSSGQGILYPLHRTKTLHLVRHAQGFHNVEGDKDPKAYLSYDLFDASLTPLGWKQVDNLKEHVKGSGLSERIELVIVSPLLRTMQTAVGVFGGGECTDVIDATPLMNQNVGDSSRSAISSQNSPPFTAVELCREHLGVHPCDKRRDITEYKNMFPAIDFSLIESDDDILWKPDIREKNEEVAARGLKFLEWLWTRKEKEIAVVTHSGFLFHTLSAFGNDCHPNVKSEICTHFANCELRSVVIIDRGMIGSNESSTNFPGKIPHGLDLPSDVADEKHAANEPTK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00341 334 SMART PGAM_5 67 263 IPR013078 -
Vivi3g00341 334 Pfam Histidine phosphatase superfamily (branch 1) 68 151 IPR013078 -
Vivi3g00341 334 FunFam Phosphoglycerate mutase-like protein 1 62 309 - -
Vivi3g00341 334 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 62 296 - -
Vivi3g00341 334 CDD HP_PGM_like 67 138 IPR013078 -
Vivi3g00341 334 Gene3D - 66 306 IPR029033 -
Vivi3g00341 334 MobiDBLite consensus disorder prediction 304 334 - -
Vivi3g00341 334 SUPERFAMILY Phosphoglycerate mutase-like 65 297 IPR029033 -
Vivi3g00341 334 MobiDBLite consensus disorder prediction 25 49 - -
Vivi3g00341 334 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00341 Vivi-Chr3 6109132 6114623 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00341 - - cam:101489637 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00341 3 6109132 6114623 Vivi3g00341 3 6109132 6114623 ECH