Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00327 ATGGCGGAGGCTAGATTTGGTGAGCAAACGGCCTCTAAATGGGTGCTAAGTATTCAAAGCTATTTATGGCAGGGTTCAGCTCATACAGGCCCAGCTTTAACACCTGTAGAAGTGTTGGTTGCAATCCATGGAATTGTTCCCGAGAAAGATGGTCTTGCACTTAAGAAGATAACAGATGCTTGCTCGGCTTGTTTTGAACAACGTACAGTGTTCACTCAGCAGGTTCTGGCCAAGGCATTGAATCAGATGGTTGATCAAACACCGTTGCCCCTGCTTTTTATGAGAACAGTTATTCAGGCAGTTGATGCTTTCCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACCAAACAGGTGTGGCGTATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTATATATCAGACGCAGCCACGTTCTTTTCAAGTATTGTTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAACAGGCATGCTAATCTCAGAGCGCCCCTTGCTTCTTATGCCAACCAATCAACTGTAAAATCTTCAATTAGTAGATCAACTTTAGTTGTTCTTGGTCTTGCAAATGAAACACATGTGCAGCAACATTTATCAGCATCATTGCACCATTCCGAGAAGGGTGCTTCAGTTAGTGGGGCAACTCTGACATGA 669 0.4365 MAEARFGEQTASKWVLSIQSYLWQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCIYQTQPRSFQVLLQLPPQQLESALNRHANLRAPLASYANQSTVKSSISRSTLVVLGLANETHVQQHLSASLHHSEKGASVSGATLT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00327 222 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 22 221 - -
Vivi3g00327 222 Pfam Symplekin tight junction protein C terminal 25 162 IPR022075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00327 Vivi-Chr3 5868316 5879242 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00327 K06100 - vvo:131657459 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00327 3 5868316 5879242 Vivi3g00327 3 5868316 5879242 ECH