Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00324 ATGGCGTCAATCCGACGGACGCTATCTCCGGCCTATAACGACCGTCACCACTACATAAACTCCGTCTTTTCGTCTTCCTCTCCGTCTCACAAACTTCCTTCTTCGAACGCTAACTACTCCGCTTTAGCTTCCTCGTTTCAGAAACTAATCGGTAGCGTTTTCATGCGACGCTACAATCGGAAGGGACAATGGCGACGAATTGCTTACAGGTGTGTGATTTTCTTCTTCGCCGGGATTTTGTTAGGAATGTTTCCGTTTGGTAATCTTGTTCATGATATTCCTCATCGACGGAACGAGAAAATCAGTTTCGATATCAAGACTCCTCACGCCGACGATGATGCTCAGTTAGTTCTGGACGATCGTGTTCCGGTAAAGCGCGGTGCCGGCGGCGGAGGTGGAGGCGGAGTAGGTGAAGACAACGGAGGCGGTGGTGGCGGTGGAGATACTGGTTTTGTGATTGATCCTGTGAGTTTGAGCTTGAGGATGAACGATGAGAAGGAGAAGGAGAAGGTGAAGGTGAAGGCAAGGGATTTGGTTGAATCTGAGAGGTTTGATATTGTGACGAGGAAGCAATTGATTGTGGTGACACCGACTTATAACCGAGCTTTTCAGGCGTATTTTTTGAATAGGTTAGGGCAGGTTTTGAGATTGGTGCCGCCGCCGGTTTTATGGGTGGTGGTGGAGATGAATTCTGCTTCTATGGAGACTGCTGAGTTGTTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGTGGTAAGAATTCGACTGATTTGAAGGATAGAGGAGTTCATCAGAGGAATACGGCGTTGGAGCATATTGAACATCATAAGCTTGATGGGATTGTTTACTTTGCTGATGATGATAATGTGTATTCTCTTGAGTTGTTTCAGACAATTAGAGATATCAGTCGTTTTGGCACTTGGCCTCTCGCCATGCTTGCACCAAGCAAAAACAAGGCTATTTTGGAGGGTCCGGTATGCAATGGAAGCCAAGTGATTGGGTGGCATACAAATGAGAAAAGTAAAAGACTTCGAAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCTCAATCCTGTGGGATCCCAAGCGGTGGCGACGCCCTACTTCAAAACCTATACGGCAATTAGATTCAGTGAAGGAGGGTTTTCAGGAAACCACCTTTATAGAACAATTGGTAGAAGATGAGAGGCAAATGGAAGGTTCTCCTGCTGGTTGTAAGAAAATAATGAATTGGCATCTCCATTTGGATGTTCATAATGTAGTTTATCCAAAGGGTTGGATGCTTGAGAAAAACCTAGATGCTGTCATTCCCATCAAGTAA 1332 0.4542 MASIRRTLSPAYNDRHHYINSVFSSSSPSHKLPSSNANYSALASSFQKLIGSVFMRRYNRKGQWRRIAYRCVIFFFAGILLGMFPFGNLVHDIPHRRNEKISFDIKTPHADDDAQLVLDDRVPVKRGAGGGGGGGVGEDNGGGGGGGDTGFVIDPVSLSLRMNDEKEKEKVKVKARDLVESERFDIVTRKQLIVVTPTYNRAFQAYFLNRLGQVLRLVPPPVLWVVVEMNSASMETAELLRKTGVMYRHLVCGKNSTDLKDRGVHQRNTALEHIEHHKLDGIVYFADDDNVYSLELFQTIRDISRFGTWPLAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSSILWDPKRWRRPTSKPIRQLDSVKEGFQETTFIEQLVEDERQMEGSPAGCKKIMNWHLHLDVHNVVYPKGWMLEKNLDAVIPIK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00324 443 SUPERFAMILY Nucleotide-diphospho-sugar transferases 191 436 IPR029044 -
Vivi3g00324 443 CDD GlcAT-I 192 420 IPR005027 GO:0015018|GO:0016020
Vivi3g00324 443 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 63 437 IPR005027 GO:0015018|GO:0016020
Vivi3g00324 443 MobiDBLite consensus disorder prediction 125 144 - -
Vivi3g00324 443 FunFam Glycosyltransferases 191 433 - -
Vivi3g00324 443 Pfam Glycosyltransferase family 43 211 419 IPR005027 GO:0015018|GO:0016020
Vivi3g00324 443 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 191 437 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00324 Vivi-Chr3 5732041 5735426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00324 1 443 Glycosyltransferase AT1G27600 56.696 2.75e-172 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00324 K20869 - gmx:100809892 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00324 3 5732041 5735426 Vivi3g00324 3 5732041 5735426 ECH