Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00316 ATGGCGGAATTTTCACTTCCCAATGACTCTTATTTCCTCGGATTCGACAGTTCAACTCAATCGTTAAAAGCAACGGTTTTGGATTCGAATCTCAACATCATTGCTTCTGAATTGATTCATTTCGATTCAGATTTACCGCATTACAAAACCAAAGACGGTGTTTACAGAGACCAATCCATCAATGGAAGAATCGTTTCTCCCACGTTAATGTGGGTGGAAGCACTCGATCTCATTTTGCAGAAGCTTTCGAAATCGAATTTGGATTTCTCCAAAATTGCCGCTGTTTCCGGTAGTGGACAGCAGCATGGAAGTGTTTACTGGAAAATTGGAAGTTTGAAAATATTATCAGCATTGGATTGTAAGAAGCCTTTGTTGGAACAGCTTGAGAATGCTTTTTCGATTAAGGAGTCGCCGATTTGGATGGATTGTAGTACGACGGTTGAGTGTAGGGCGATAGAGGAGGCTTGTGGGGGGGCTTTGGAGTTGGCGAGAGTGACGGGGTCGCGCGCTTATGAGAGGTTTACGGGGCCTCAGATTAAGAAGATATTTGATAAGCAGCCTGATGTTTATAATGAGACGGAGAGGATTTCGCTTGTTAGCTCGTTTATGGCGTCGGTTTTTATTGGGGGGTATGCTGCTATTGATCATTCGGATGGTGGTGGCATGAATTTGATGGATATTAAAGCAAAGGCTTGGTCGAAAGTTGCACTTGAGGCAACTGCGCCGGGTTTGGAGTCAAAACTTGGAGATTTGGCTCCTGCATATGCTGTTGCGGGAAATATTGCTTCATATTTTGTAGAGAGGTATCACTTTAACAAGGATTGCTTGGTCATTCAATGGTCAGGAGACAACCCTAACAGTGTGGCAGGTCTGACACTAAATATTCCAGGAGATCTCGCCATCAGCCTCGGCACCAGTGATACCGTATTTATGATCACTAAAGATCCTAATCCAGGGTTAGAGGGACATGTCTTCCCTAGTCCAGTTGATGGAGAAGGTTACATGGTAATGTTAGTCTACAAAAATGGGTCCCTTACTCGAGAAGATGTGCGTGACCGTTACGCGGAAAATTCTTGGGATACTTTCAATAAATTTCTGCAGCAGACACAACCTTTGAATGGTGGGAAGTTAGGTTTCTACTACAAGGAGCATGAAATTCTACCACCTCTTCCAGTTGGTTATCACCGCTATATTATAGAAAATTTCACAGGCGCATTGGATGGAATGAAGGAGCAGGAAGTGAAGGAGTTTGATCCTCAATCTGAGGTACGAGGATTAATTGAGGGTCAATTTCTTTCAATGCGCGCTCATGCTGAAAGATTCGGTATGCCTTCTCCACCAAAGCGAATTATAGCCACTGGTGGAGCATCGGCCAATCAGAGCATCCTCAACTCAATAGCTTCAATTTTTGGCTGTGATGTTTATACAGTTCAGAGACCTGATTCAGCTTCTCTTGGAGCTGCAGTGAGAGCTGCTCATGGCTGGCTTTGCAACAAGAAGGGTGGTTTCTTACCGATATCAGATATGTACATGGATAAATTGGAGAAAACATCTTTAAGCTGCAAGCTTTCAGCTAGTGCTGGGGATCAGGAGTTGTTTTCCAAGTATGCTGCTGTATTGAAAAAGAGAATCGAGATAGAGAATCGTCTGGTTGAAAAGCTTGGACGCATTTGA 1674 0.4361 MAEFSLPNDSYFLGFDSSTQSLKATVLDSNLNIIASELIHFDSDLPHYKTKDGVYRDQSINGRIVSPTLMWVEALDLILQKLSKSNLDFSKIAAVSGSGQQHGSVYWKIGSLKILSALDCKKPLLEQLENAFSIKESPIWMDCSTTVECRAIEEACGGALELARVTGSRAYERFTGPQIKKIFDKQPDVYNETERISLVSSFMASVFIGGYAAIDHSDGGGMNLMDIKAKAWSKVALEATAPGLESKLGDLAPAYAVAGNIASYFVERYHFNKDCLVIQWSGDNPNSVAGLTLNIPGDLAISLGTSDTVFMITKDPNPGLEGHVFPSPVDGEGYMVMLVYKNGSLTREDVRDRYAENSWDTFNKFLQQTQPLNGGKLGFYYKEHEILPPLPVGYHRYIIENFTGALDGMKEQEVKEFDPQSEVRGLIEGQFLSMRAHAERFGMPSPPKRIIATGGASANQSILNSIASIFGCDVYTVQRPDSASLGAAVRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSASAGDQELFSKYAAVLKKRIEIENRLVEKLGRI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00316 557 SUPERFAMILY Actin-like ATPase domain 11 290 IPR043129 -
Vivi3g00316 557 Gene3D - 13 512 - -
Vivi3g00316 557 CDD FGGY_D-XK_euk 11 493 IPR042024 GO:0004856|GO:0042732
Vivi3g00316 557 Pfam FGGY family of carbohydrate kinases, N-terminal domain 139 287 IPR018484 GO:0005975|GO:0016301
Vivi3g00316 557 FunFam Xylulose kinase 2 13 310 - -
Vivi3g00316 557 Pfam FGGY family of carbohydrate kinases, C-terminal domain 299 494 IPR018485 GO:0005975|GO:0016301
Vivi3g00316 557 Gene3D - 292 477 - -
Vivi3g00316 557 SUPERFAMILY Actin-like ATPase domain 296 495 IPR043129 -
Vivi3g00316 557 PIRSF GlpK 124 550 IPR000577 GO:0005975|GO:0016301
Vivi3g00316 557 PIRSF GlpK 9 117 IPR000577 GO:0005975|GO:0016301
Vivi3g00316 557 PANTHER SUGAR KINASE 11 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00316 Vivi-Chr3 5383637 5387573 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00316 K00854 - gmx:100778495 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00316 3 5383637 5387573 Vivi3g00316 3 5383637 5387573 ECH