Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00309 ATGGATCCTTGTCCTTTTGTCCGTCTCACCATTGGTAATCTCGCCCTCAAAATCCCCGTTGCTTCCAAAGCTGCTCGCTCCGTCGTTCATCCGTCGTCTTCTCCATGTTTCTGCAAAATCAAACTCAACAACTTTCCTCTCCAGTCCGCTCAAGTTCCTTTCATTCCTCACGATAACCACTCACCTGACTCACAGTCACAGATTCAACCTATCGCTGCATCTTTCCATCTCAGTAAAGCTGATCTCGATAAACTCGCCGGAAAGTCTATTTTCGTTAAGAAACTCTGCCTGAACATCTCGATCTACACTGGTCGGAGTGGGACCACCTGTGGTGTTAACTCCGGGAGACTCCTCGGGAAGGTCTCTGTTCCGTTGAATCTCACCGGAGCTGTGACCAAGGCTACAGTGTTTCATAATGGATGGATTACAGTCGGAAAGGATGCGAAAGGCGCTTCTGCACAGTTTCATCTGAATGTTAAAGCGGAACCTGATCCTAGATTTGTTTTCCGGTTCGACGGCGAGCCGGAGTGTAGTCCGCAAGTTTTTCAGATCCAAGGCAACATTTCGCAACCTGTTTTCACGTGCAAGTTCAGTTTCAGAAACAATAATGGTGACCGTAATCAACGTTCAAGATCATTGCAATCGGAAGCAGGAAGTTCTAGAAGCTGGTTAAGTTCGTTCGGAAGTGAACGTGAGCGTTCAGGGAAAGAACGGAAGGGATGGTCTATTACAGTTCACGATCTTTCCGGTTCGCCGGTAGCAGCTGCTTCAATGGTTACACCTTTCGTTGCTTCACCCGGTTCGGACCGGGTTAGTTGCTCTAACCCCGGTTCATGGCTTATTCTACGTCCTGGAGATGGTACATGGAAGCCCTGGGGGAAACTCGAAGCGTGGCGTGAGCGTGGTGGTTCCGATGGCCTTGGTTACAGGTTCGAGCTTATGCCGGAAACAAATGGAGGAATGAGTGCCGGAGGTATAGTCATTGCGGAGTCAACGTTGAGTTTGACTAAAGGTGGAAAATTTGTTCTCGATTTGAGTAGCCGTTGCGGTGGAAATGGTGGTGGAGGAGGTGGTGGTTTGAATGGTCGCGCTACGCCGGGAAGTGCGACTTCTCCGGTGTGTAGTCCGAGAGGAAGTGGTGATTATGGTTACGGGCTTTGGCCTTATTGTATGTACAGAGGGTTTGTTATGTCGGCGAGTATCGAGGGAGAAGGGAGGTGCAGCAAACCTACGGTGGAGGTGAGTGTGCCTCACGTGAATTGCACGGAGGATGCTGCGGCTTTTGTAGCGTTAGCAGCAGCCGTTGATTTAAGCGTGGATGCTTGCAGGCTATTCTCTCAACGGTTAAGAAAAGAGCTTTGTCAGCAAATGGATTTACTTGGATGA 1386 0.4949 MDPCPFVRLTIGNLALKIPVASKAARSVVHPSSSPCFCKIKLNNFPLQSAQVPFIPHDNHSPDSQSQIQPIAASFHLSKADLDKLAGKSIFVKKLCLNISIYTGRSGTTCGVNSGRLLGKVSVPLNLTGAVTKATVFHNGWITVGKDAKGASAQFHLNVKAEPDPRFVFRFDGEPECSPQVFQIQGNISQPVFTCKFSFRNNNGDRNQRSRSLQSEAGSSRSWLSSFGSERERSGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGKLEAWRERGGSDGLGYRFELMPETNGGMSAGGIVIAESTLSLTKGGKFVLDLSSRCGGNGGGGGGGLNGRATPGSATSPVCSPRGSGDYGYGLWPYCMYRGFVMSASIEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQMDLLG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00309 461 Pfam Protein of unknown function (DUF1005) 1 454 IPR010410 -
Vivi3g00309 461 PANTHER OS08G0163500 PROTEIN 1 456 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00309 Vivi-Chr3 5075808 5078171 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00309 - - vvo:131660133 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00309 3 5075808 5078171 Vivi3g00309 3 5075808 5078171 ECH