Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00287 ATGTTCTCAATTGCAGCTATCAATGACACCGACTCTAAATGCCAGTGGGAACCACTAGCTCCCACCAAAGAAGCTCAGGAATTTCATCTTTCTCAAACTTATCATGAAGGACTTGTCAAGTTACAAGCAAAGGAGTATGAAAAGGCTCGCGAGCTCTTAGAATCTGTTCTTAAAGATCCTCTCATTGCTAATGCTAAGGTGGATAGAGGTGCTGGTGACAGTCATCTATTGCAACTAAGGTTTTTAGCGTTGAAAAACCTTGCCGCTGTTTTTCTTCAGCTAGGCTCTACTCATCATGAGAATGCTCTACATTGTTATCTTCAAGCTGTGGACATTGATTCTAAAGATTCCGTTGTATGGAACCAGCTGGGAACATTGTCATGTTCAATGGGCTCGCTAAGCATTTCACGTTGGGCATTTGAACAAGGCCTCTTGTGCAGCCCTAATAACTGGAATTGCATGGAAAAACTTTTAGAAGTTCTTATCGCAATTGGTGACGAAGTTGCTTGCCTTTCTGTTGCTGAGTTGATTTTGAGGCACTGGCCATCACATTCTCGCGCTTTGCATGTTAGAAATACTATTGAAGAATCGGAACCATTGCCATTTGCTCCCAGAGGCATAGATAAATTGGAACCAAAACATGTGCGGCTCAAATTTTCTGCTAAGAGAAAAGCTAATGATGAGAATCTAGATGAGGATGTTGCATTTAAGAAGCTGAACCAAAACAAAGATCTATACCTCACCGAAGCTTCCTGGGTGGCTCTTGCTGATGCACTGCTGGGGATCTTATCGCCTTCATATCTGAAAATTTCTGAGGTAGAACCTAAAGAAACGTGCAGTTCTCCGGACATTAGGCTAAGAATAAACTTGCCTTGTAGTTCAGAAGCTGCTCTGAACACCATGGAAGTGAAAGGGTTAAGTGGTGAAAATAGTGCTTTTGGTGAAGCTAAAGTAGGACCAGCACGTGTTTTTAAAGAGAAAGAAGCTAATACCCAAGAAGAACAACCACATGAAAGGCGAAGTTCTCGACTTGAAAGGCTCCGCAGTCGTAAACCAGGGAAAGAAGATTCAAACTCTTGCGATAAGGACCCTGCCAAGGTTGTCATTCATTATCTAGAACCTTTCATTGCTGGTGGATTGGGTGATCAAGAAACTATCAATAGTGATACCACGACACTATCCTCCTCAGGAAATTCTGAATATGATCATGTTTCTGCGTTTTTAAGACATACTTCAAATAATTATGGTGCTTACCATATGGGACACTTGCTGTTAGAAGAAGTTTCAAGACAAGGCCTCTCATTTCAGGATGCTTTTGTCAAGTTTCTGGAGTTGGAAAAGCTAACAAGGCATTGGGGAAAGGATAGAACTGCTGAGTGTAACCTTTTTCTTGCTGAGCTGTATTATGATTTTGGGTTATGCTCACCCACTGGTTCTAAACAACTGGAATGGATGTCAGAGGCATCTTATCAGCTTTGCAAGATTGTAGAGTCTGTAGCTCTCGACTATCCTTTTCACTTGACTAGTGCCTTGAATGAAGGTTGCATTTTAGTTGATGGTTTCCAAGAGACTAGTGGAACGTCAACAGACACCTCAACTGAGAATAATTCAGATTTAGACAGCTCTATTCTGATGAAAAACAGTTCATTCTGGTCTCGATTTTACTGGATAAGTGGGAGATTGTCTATTTTTGAAGGCAACAAGGAAAAAGCTTGTGAAGAATTTTGTATTGCTTTGTCACTTTTGGCAAAAAGGGAAAAAATGGAAAATTCTCCAGGTTCAGTCCCCCGCCCACATTGCAAGGATGTTAAAGAGATAAACATTGATAGAGTTCTCTACGAAGTTAATATATTGAAGGTCGATTTTTTGATGGAAAAGTCTGTCACTAGGATGATGGAGCAAGAAAAGTATGTTGACTGTGTATCTCTACTTACTCCACTTCTGTTCTCTACACAGGATGTCTACTTCAATTCATTTTCTTTATCCATGGCAGATAAAAAAGATGAAAAGATAACTTCCACCGAGCTCATGGCTCTAGATGTTCTAATTGAAGCATGTCAGAAGATAACGCCAATGGATGTAGATCTGTATTTCAATTGTCATTACAGAAAACTGAAAATACTTATGGCATTGATGGGTTTGAGTACAAGTGTTACATCATTTAAATCTTCAGACCATACACTTGGTTTCAGTGCACCTTCTAATTTGGATGACTCAAATGAAAGCTCTAGCAAGCATTGTAATCACTTGGTTGCAGAGGAAGCGAAGGCCCTCTCTGACTTTATATCACAAGTGAAGAAAGTTATTGATCACTGTGGAGATTCCGATGGCCTCACTGTTCCAACAAGCAGCATTTGTCAAATGCAATCTCTGCTGCTGTTAATCATGGGCTATGTCGCGAATGTACTTGTGTGCAACATAACCTCTGCACAAGTAATCTCTGATCAAGTGGAAAGTAACTGTTTTGTTGATGCAGCCATTGTTTTCTGCAAACTTCAGCATCTTAGCCGAACCACACCTATCGAAACTCAAGTTGATTTAATTGTTGCAACACATGACATGCTTGCTGAATATGGGCTTTGCTGTGTCGGTGAAGGTGGCAAAGGTGGAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTATTGGGCTTGGATATGAAGTTCAAATCCAGCTTTAACCTTAAAAATAAAGAATCAATGCGATGCGAAGAAGCATCCAAAAACAGTGTTGTCAATTTGTCTATGGAAGATTCAATATCAGATACATTAGATTTCCGGATGGATTGGACCAGAATTGATGAAATTACCTCTGTGAAAAAGGATGATTCTGAGGGAATATCTAAAGAAGTCTCATCTTGCAAAGTTCAAAATAAAGACAGGAAGGAAGTAGAGTGTGAAGATAGCGTGGTTGCTGGGACTGACCGTAAGTTAGTTAAGGGTGAAAATTCATGCAATCAATTGATTGAACATGGAAATGAACTTTCTGAAGATGAAACAGAAGAACTTGAGTCTAAAATTGACGGGGCCTTAGATCAGTGCTTTTTCTGCTTATATGGATTAAATCTAAATTCTGATTCATCCTATGAAGATGATCTAGTGATGCACAAAAATTCAAGTCGGGGAGATTATCAGACCAAAGAACAGTGTGCTGATGTTTTCAAATATGTTCTTCCTTATGCGAAGGCATCTTCTAAAACTGGACTGGTCAAGCTTCGCAGAGTTTTAAGAGCTATTAGGAAACACTTTCTTCAGCCACCAGAGGACCTTTTGACAGGAAATCCAATTGATAAGTTCCTTGATGATCCTAATCTATGTGAAGATAAACTATCCGAGGAGGCCGGATCTGAAAGATTTCTTGAAACTATAACTAAGACCATGTTTCCTGATGTGGGAGGTCTTGGACATTATAACACAACACTATTGAGGAGGTCCGAGCCATATTTAGACGTCTACTGTAACTTGTTTCATTTCTTGGCTCTGTCTGAGGAAATGAGTGCAACTGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGGGAAGAATTTGTTGAGCAAAATGCTAAGCTCTTCAAATATGATCTCATGTACAATCCTCTACGCTTTGAAAGTTGGCAGCGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTGCTTAATGATGGTAGCAAGCACATAAACGTAGTAGGATGGAGGAAGAATCCCACTTTATCTGAGAGAGTGGAAACAAGCCGAAGAAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCTCAGCAGTGCGAGATACATGAGTTATTGGCATTGGTATACTACGACAGTCTTCAAAGTGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCAACATGGATGGCGTTCTGTGAGAGCTCAATGAAACATTTTAAGAAAGCCTTCACACTTAAGCAAGATTGGTTACATGCATTTTACTTGGGTAAACTTAGCGAAAAACTTGAATATTCACATGAAATTGCTCTATCATATTACACAAAAGCTATTGCTTTGAACACATCAGCTGTTGATCCTGTCTATAGAATGCATGCCTCGCGCTTGAAACTATTATTTAAATGCGGAAAACAGAATGTGGAGATTCTGAAGGTTCTTTCAGCAGACTCTTTTGATCAATCTGTAAAAGAAGCTGTCACAAGTATCCTTGGCAGCACAGATAGCTCATCTTTAAATACAAAGGAGAGCTGTATTCGTGCCAATTCTGTGGATACTAAGCATGAAAGGTTACTCAAATTGGATACTGCGTGGTCCATGCTTTACAATGATTGCCTTTCTGCACTTGAAACTTGTGTCGAGGGGGAACTCAAGCATTTCCATAAGGCCAGATACATGTTGGCTCAAGGGTTGTATAGAAGGGGGGAGAGTGGTGATTTAGAGAGAGCAAAAGATCAACTATCTTTCTGCTTCAAATCTTCACGCTCATCATTTACCATAAATATGTGGGAAATCGATAGCACGGCAAAAAAAGGAAGGCGCAAGACACCGGGTTCTACTGGGAATAAAAAAGTCCTCGAGGTTAACTTACCAGAAAGTTCTCGAAAATTCATTACCTGCATTCGAAAGTATTTGCTGTTTTATCTCAAACTATTGGAGGAGACTGGAGATAGATGTATTCTTGAGCGTGCATATGTTTCCCTCCGGGGAGATAAGCGGTTTTCATTATGCCTTGAAGATCTTGTACCCGTGGCTATCGGAAAGTATTTAAAAGCCCTGATTTCAGCCATGCGCCATTCTCAGACTACTGCCTCTTTTTCGGTGAGCAGCCCTGACAATGTGTTGGATAAAATCTTTGCTTTATTTATGGAGCAAGGAAGCTTGTGGCCAGAAATATGCAGCTTGCCTGAAATTGAGTCTCGTGATACATCAGAAAGTATCATATATGGGTATCTCCACGAACATATATCATTGTTGGAGATAAATGGAAAACTGGAAACTCTTGAAACAGTTAATGACAAGATTCGTAAACGTTTTAAGAATCCTAAGCTCTCAAATAGTAGTTGTGCAAAAGTTTGTAAGCATGCTTCTGTTGCTTTGTGTCGATCTCTTATCTACAGTTTGGCACAAATTACTCCTGTATCATGTGGATTCTCAAATGGGATTCAAGTTCGTAATTTGAATGATGATGGGATGGAAAATAGCCAGCTGCTCTGTATTGATTTGCAGCCACGTGAATTATTGATTACATCTTTTGAAGATCCATCTATTTTAGGAAAGATTGAAACAAAATGGAGTCCCATTCTATCAAAAATAAAAAATATTCTGATCAAGAAAGCTTCTGATGGAAATTTGGAAACAGCAAACACTTTGCTCAGAGCTTGCTATATTTTTTACCGGGAGAGTTCTTCTGTGGTGCTTACCTCTGGCCTCAACTGTTATGTAATTCCATCTCAATTAGTAACAGAGACACCGTTCAGTCCAACTATCACCGGAGTTGAAGCCCTTGATCTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCCTATGCTATGGTACACGGACGTTATGCAAATATATCAGTTGTTGTGAAGCATTGTGAAGAAGGTTCAAAGTCGAAGATGAGGAGGGGAAGTGGAATGTCACCAGCGCTTACAAACTCGCCTGCTACTGCCACAACTCTTCCTGGTAGCAGTAGAAGTGGACCATATGAGGTTGATTCTACCCATGTCACAACAGCAGGGAGTGGTTCACTTTGCACTGATGCTGTTCAGAAGAATCTGTTTGGTTCTCCCCAGTTGCATCAATGTACCACTAACGATGCAGAGAGAAGCAATGCAAACGCGCGTGAAGGAGAGACACGAGATTGA 5862 0.4026 MFSIAAINDTDSKCQWEPLAPTKEAQEFHLSQTYHEGLVKLQAKEYEKARELLESVLKDPLIANAKVDRGAGDSHLLQLRFLALKNLAAVFLQLGSTHHENALHCYLQAVDIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVRNTIEESEPLPFAPRGIDKLEPKHVRLKFSAKRKANDENLDEDVAFKKLNQNKDLYLTEASWVALADALLGILSPSYLKISEVEPKETCSSPDIRLRINLPCSSEAALNTMEVKGLSGENSAFGEAKVGPARVFKEKEANTQEEQPHERRSSRLERLRSRKPGKEDSNSCDKDPAKVVIHYLEPFIAGGLGDQETINSDTTTLSSSGNSEYDHVSAFLRHTSNNYGAYHMGHLLLEEVSRQGLSFQDAFVKFLELEKLTRHWGKDRTAECNLFLAELYYDFGLCSPTGSKQLEWMSEASYQLCKIVESVALDYPFHLTSALNEGCILVDGFQETSGTSTDTSTENNSDLDSSILMKNSSFWSRFYWISGRLSIFEGNKEKACEEFCIALSLLAKREKMENSPGSVPRPHCKDVKEINIDRVLYEVNILKVDFLMEKSVTRMMEQEKYVDCVSLLTPLLFSTQDVYFNSFSLSMADKKDEKITSTELMALDVLIEACQKITPMDVDLYFNCHYRKLKILMALMGLSTSVTSFKSSDHTLGFSAPSNLDDSNESSSKHCNHLVAEEAKALSDFISQVKKVIDHCGDSDGLTVPTSSICQMQSLLLLIMGYVANVLVCNITSAQVISDQVESNCFVDAAIVFCKLQHLSRTTPIETQVDLIVATHDMLAEYGLCCVGEGGKGGEGTFLRFAIKHLLGLDMKFKSSFNLKNKESMRCEEASKNSVVNLSMEDSISDTLDFRMDWTRIDEITSVKKDDSEGISKEVSSCKVQNKDRKEVECEDSVVAGTDRKLVKGENSCNQLIEHGNELSEDETEELESKIDGALDQCFFCLYGLNLNSDSSYEDDLVMHKNSSRGDYQTKEQCADVFKYVLPYAKASSKTGLVKLRRVLRAIRKHFLQPPEDLLTGNPIDKFLDDPNLCEDKLSEEAGSERFLETITKTMFPDVGGLGHYNTTLLRRSEPYLDVYCNLFHFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHINVVGWRKNPTLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQSVVPFYDQRSVLPLKDATWMAFCESSMKHFKKAFTLKQDWLHAFYLGKLSEKLEYSHEIALSYYTKAIALNTSAVDPVYRMHASRLKLLFKCGKQNVEILKVLSADSFDQSVKEAVTSILGSTDSSSLNTKESCIRANSVDTKHERLLKLDTAWSMLYNDCLSALETCVEGELKHFHKARYMLAQGLYRRGESGDLERAKDQLSFCFKSSRSSFTINMWEIDSTAKKGRRKTPGSTGNKKVLEVNLPESSRKFITCIRKYLLFYLKLLEETGDRCILERAYVSLRGDKRFSLCLEDLVPVAIGKYLKALISAMRHSQTTASFSVSSPDNVLDKIFALFMEQGSLWPEICSLPEIESRDTSESIIYGYLHEHISLLEINGKLETLETVNDKIRKRFKNPKLSNSSCAKVCKHASVALCRSLIYSLAQITPVSCGFSNGIQVRNLNDDGMENSQLLCIDLQPRELLITSFEDPSILGKIETKWSPILSKIKNILIKKASDGNLETANTLLRACYIFYRESSSVVLTSGLNCYVIPSQLVTETPFSPTITGVEALDLSIPRKLLLWAYAMVHGRYANISVVVKHCEEGSKSKMRRGSGMSPALTNSPATATTLPGSSRSGPYEVDSTHVTTAGSGSLCTDAVQKNLFGSPQLHQCTTNDAERSNANAREGETRD 1953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00287 1953 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Vivi3g00287 1953 MobiDBLite consensus disorder prediction 1877 1903 - -
Vivi3g00287 1953 MobiDBLite consensus disorder prediction 318 362 - -
Vivi3g00287 1953 MobiDBLite consensus disorder prediction 1930 1953 - -
Vivi3g00287 1953 Coils Coil 993 1013 - -
Vivi3g00287 1953 MobiDBLite consensus disorder prediction 1869 1903 - -
Vivi3g00287 1953 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Vivi3g00287 1953 Gene3D Tetratricopeptide repeat domain 22 199 IPR011990 GO:0005515
Vivi3g00287 1953 MobiDBLite consensus disorder prediction 320 362 - -
Vivi3g00287 1953 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1942 IPR033053 GO:0006325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00287 K17613 - gmx:100783547 3044.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00287 3 4785063 4802845 Vivi3g00287 3 4785063 4802845 ECH