Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00266 ATGGACAATAGCACCGATGATGAGATCGAGGACGAATTTCAGATCGAGCAATTCCTCTACGAAGTCGAAGAACAATTCAACAACCCCTTCCTCCACTTCCCCCCTCCCTCTCCACCATCCTCCTCCTCTTCCCAAGACCAACCTAACGACATTGCAATCGCTTCACCCGCCGAATTCACTTTCAATACCAGCATCGCCTCTTTGCACACATACCTCGGTGATGTGGAAGACACGCGCCACCGGACTGCTTTTTTGGACGGCGGAGCTATATTGAACATTCCACTGTTTTGTCTTCAAGGAGTTGTACTCTTTCCTGGGGCCACTCTTCCCCTTAGGGTTACTGTTTCTCGTTTTGTGACTGCTATTGAGAGAGCTTTAAGTCATGTTCCTCATACCATTGCTGTGATTCGGGTTCATAGGGAGACTGGAATTTTTACGATGAAAGCGGCAAGCATTGGGACAACTGCAGTGATTCGGCAATATGGGCGTCTAGAAGATGGTTCGCTGAATGTGGTGACCCGTGGACAACAACGATTTCACCTAAGGCGGTGTTGGAATGATGTGGACGGAGTGCCTTATGGAGAGGTCCAAATTATCGAGGAAGATTTACCATTGAGAACTCCAAGGGATGCTTTTGGCAAATCAGCATCATCATGTAATATGCTTTCCAGCCGTGTTAAAATGCATGGCTTAAAAAACGGGGAAAATGATTCAAAAGCAAATTCAGATGAGGGTTTTGACAGTGAGCTTTCACCAATGGAAAGTAAAATCCACCTATCTGATTCTGCATCTGAAATGATGGATGTATTAGCAAACAGTAGTGATCAGGAAATAAGGTCCAATTTGGATTCGAGCATTGGGATCTGTTCCACTTCTGGAAAGCTGTCATCCAAAGAAGAGCTTAATAATAAACCATCACATATAATTTCAAAAGCATTCTTACCCCACTGGGTATATCGTATGTATGACTCCTATTGGCTTGCACAAAAGGCTGCAGATATGTGGAAGCAAATAGTCGGGGTTCCTAGTATGGATAGTCTCATCAAGAAGCCTGATGTTTTATCATTTCATATCGCCAGTAAAATACCTGTTTCTGAATCTACAAGGCAAGAGCTTTTAGACATCGATGGCATCGTATATAGGTTGCGCCGGGAAATTGAATTACTAGAGAGCATTGATCTTGTCCGATGTAAAATATGCCAAACTACAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAATGAGGGTCCTCTTGGTGCCTATGTAAATCCCGACGGTTATGTACACGAGATAATGACTCTTTACAAAGCCAATGGTTTAGCTCTCATGGGGCCAGCAGTTACAGAATACAGCTGGTTTCCCGGATATGCATGGACAATTGCTATTTGTACCACATGTAGAACCCAAATGGGATGGCTTTTTACAACCACCAACAAAAAACTGAGGCCTGCTTCATTTTGGGGTATTCGGAGCTGTCAACTTGCCGAAGAAATACGCCGAAACGTTTAG 1512 0.4385 MDNSTDDEIEDEFQIEQFLYEVEEQFNNPFLHFPPPSPPSSSSSQDQPNDIAIASPAEFTFNTSIASLHTYLGDVEDTRHRTAFLDGGAILNIPLFCLQGVVLFPGATLPLRVTVSRFVTAIERALSHVPHTIAVIRVHRETGIFTMKAASIGTTAVIRQYGRLEDGSLNVVTRGQQRFHLRRCWNDVDGVPYGEVQIIEEDLPLRTPRDAFGKSASSCNMLSSRVKMHGLKNGENDSKANSDEGFDSELSPMESKIHLSDSASEMMDVLANSSDQEIRSNLDSSIGICSTSGKLSSKEELNNKPSHIISKAFLPHWVYRMYDSYWLAQKAADMWKQIVGVPSMDSLIKKPDVLSFHIASKIPVSESTRQELLDIDGIVYRLRREIELLESIDLVRCKICQTTIAKRSDMLVMSNEGPLGAYVNPDGYVHEIMTLYKANGLALMGPAVTEYSWFPGYAWTIAICTTCRTQMGWLFTTTNKKLRPASFWGIRSCQLAEEIRRNV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00266 503 MobiDBLite consensus disorder prediction 230 251 - -
Vivi3g00266 503 MobiDBLite consensus disorder prediction 230 244 - -
Vivi3g00266 503 FunFam Blast:Protein cereblon homolog 388 503 - -
Vivi3g00266 503 FunFam Lon protease homolog 323 387 - -
Vivi3g00266 503 ProSiteProfiles CULT domain profile. 392 499 IPR034750 -
Vivi3g00266 503 Gene3D - 323 387 - -
Vivi3g00266 503 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 395 485 IPR004910 -
Vivi3g00266 503 SUPERFAMILY PUA domain-like 92 390 IPR015947 -
Vivi3g00266 503 Pfam ATP-dependent protease La (LON) substrate-binding domain 92 390 IPR003111 -
Vivi3g00266 503 Gene3D - 73 199 IPR046336 -
Vivi3g00266 503 CDD CRBN_C_like 395 491 IPR034750 -
Vivi3g00266 503 MobiDBLite consensus disorder prediction 28 49 - -
Vivi3g00266 503 Gene3D Peptide methionine sulfoxide reductase. 388 502 - -
Vivi3g00266 503 PANTHER CEREBLON 43 493 - -
Vivi3g00266 503 ProSiteProfiles Lon N-terminal domain profile. 93 391 IPR003111 -
Vivi3g00266 503 SMART lon_5 92 391 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00266 Vivi-Chr3 4620803 4624753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00266 K11793 - gmx:100779918 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00266 3 4620803 4624753 Vivi3g00266 3 4620803 4624753 ECH