Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00251 ATGGATCGTTTGCGTCCTCGCAACAGATCAGTTTTTACCGGATTCACTAATTCTGAGATTGAGAAAATGGAGAAAGTGCTAAGGGAAACGAAAGGACAATCATTGACTCAGGATTTTTACCAAAAATTGACTAAAAGTTTCAATTATTCATCTGGTCGTGCTGGGAAACCTCTCCTCAAATGGACTGAGATGGAAAGTTGGTTTCAGACTAGGCTCCAGGAATCACCACAAGTACCTGAAAATGAATTGGTTTCTCCTCAAGGGCTTCAATGTAAAGAAGGAGAAGCTGTCCGAGACCCATCAGGATTGGAATTTGAAGCTAGGTCTACAAAAGATGAGGCATGGTATGATGTCGAGACATTTCTTGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTCAAAGTCAGATTTGTTGGATTTGGAGCCGAGGAAGATGAGTGGGTCAACATAAAAACTTCTGTCCGAGAACGTTCAGTTCCGTTTGAAAATTCAGAGTGTTCCGGCCTGAAAATTGGAGACCCTGTCCTATGCTTCATGGAGAGGAGAGATCAAGCCATCTACTATGACGCTCACATTTTAGAGATCCAGAGGAGAATGCATGATATCCGAGGTTGCAGGTGCCATATCTTAATTCGGTATGATCACGACAACTGTGAGGAAAGAGTTCGCTTGAGAAGACTTTGCCATAGACCAAGATCTTAG 705 0.4298 MDRLRPRNRSVFTGFTNSEIEKMEKVLRETKGQSLTQDFYQKLTKSFNYSSGRAGKPLLKWTEMESWFQTRLQESPQVPENELVSPQGLQCKEGEAVRDPSGLEFEARSTKDEAWYDVETFLAHRFLSTGEAEVKVRFVGFGAEEDEWVNIKTSVRERSVPFENSECSGLKIGDPVLCFMERRDQAIYYDAHILEIQRRMHDIRGCRCHILIRYDHDNCEERVRLRRLCHRPRS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00251 234 Gene3D - 162 234 - -
Vivi3g00251 234 Pfam SAWADEE domain 103 229 IPR032001 GO:0003682
Vivi3g00251 234 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 10 233 IPR039276 -
Vivi3g00251 234 Gene3D - 100 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00251 Vivi-Chr3 4447801 4450270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00251 - - gmx:100801021 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00251 3 4447801 4450270 Vivi3g00251 3 4447801 4450270 ECH