Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00239 ATGAAACTGGACACAGAAACAAAGTGGTGTCTTCCAAATAATGTTGCAGTTGCAGTTGAAGATATTACTTGCATGGATAGTAACCAATCAATGGTGGTGATTGAGAAAGTGAGCAAAACGGTGCGTTTGATAGGTTTCTTGATACAAAACGGTGTGTCTAAGAGTAATAGAGTTATGCAGGATATGCATGAGATGATGAAACGAGGAAAAAACATAGGGAAAGCTCTCAACACTGTGATGGTGAAGCACCATGAAGCGCTCTCATGCCGTCCACGTGATGCTGATATGTATTTTGTTTCACCGTTGGAGTATCAGTTCAGCTGTAGCGGAAGTCCACCGCGTCTCTCTCGCGGCGCCAGCAGCAGGAGGAGGCTTTTATCTCCGGCAAAGGAGGTGCGTTGCAGGAGTGGTAATGATAAGAGGCGCGTGAAGGTGACGACGGTGTCGAGGGAGACAGAAAAGGAGAAAGAGTTTCATGTTGACCAGGCGGCTGAGGAGTTTATTGATAGGTTTTACAGAGAGCTGAGGTTGCAGAAATGGTTGGATCATAATCACCATCATCATCATCATCATTCGTAG 579 0.456 MKLDTETKWCLPNNVAVAVEDITCMDSNQSMVVIEKVSKTVRLIGFLIQNGVSKSNRVMQDMHEMMKRGKNIGKALNTVMVKHHEALSCRPRDADMYFVSPLEYQFSCSGSPPRLSRGASSRRRLLSPAKEVRCRSGNDKRRVKVTTVSRETEKEKEFHVDQAAEEFIDRFYRELRLQKWLDHNHHHHHHHS 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00239 192 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 32 183 - -
Vivi3g00239 192 Pfam Cotton fibre expressed protein 160 179 IPR008480 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi3g00239 Vivi-Chr3 4400788 4401366 Dispersed/Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00239 - - mtr:11431553 266.929