Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00236 ATGGGAGAGGAAAACAAGGCAACAAAATGGGAAGGTAAAGCCATTGTTGAGGTAAGAGGCACCAATGAGGAAATAGTATGGAGTGTGTTAGAAGATTTCTGTAACCTACACAAATGGCTACCAATTGACACTTGTTATAAATTTGAAGGAGTTGATGGCCAACCTGGTGTTGTTCGTTACTGTGCTTCAACCAAAAAAGGAACTGTTAAGTGGTTCAAAGAGAAGCTGTTGACAATAGATCATGTACAACGTTGTTTGTCATATGAAATTGTTGGTAACAACATGGGATTTAAGAATTATGTGGCTATAATGAAAGTGTTGCCGCTGAAAATCAGTGATGATGAAGGTGTAGGGTGTATGATTGAATGGGAGTGTGTTTGTGATCCAGTGGAAGGGTGGAGTTTGCAAGATTTGCATTCTTACATTGGAAACTTTCTCAATTTTATGGCAAACAAGATTGAACTTTCATACTCTCCACTCTTCAAATAA 489 0.3804 MGEENKATKWEGKAIVEVRGTNEEIVWSVLEDFCNLHKWLPIDTCYKFEGVDGQPGVVRYCASTKKGTVKWFKEKLLTIDHVQRCLSYEIVGNNMGFKNYVAIMKVLPLKISDDEGVGCMIEWECVCDPVEGWSLQDLHSYIGNFLNFMANKIELSYSPLFK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00236 162 CDD PYR_PYL_RCAR_like 10 153 - -
Vivi3g00236 162 Pfam Polyketide cyclase / dehydrase and lipid transport 24 137 IPR019587 -
Vivi3g00236 162 SUPERFAMILY Bet v1-like 24 154 - -
Vivi3g00236 162 Gene3D - 3 158 IPR023393 -
Vivi3g00236 162 PANTHER LACHRYMATORY-FACTOR SYNTHASE 4 155 - -
Vivi3g00236 162 FunFam Lachrymatory-factor synthase 3 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00236 Vivi-Chr3 4355509 4356105 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00236 - - gmx:100798895 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00236 3 4355509 4356105 Vivi3g00236 3 4355509 4356105 ECH