Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00235 ATGTCTTCCATCGAATCGCAGATGGAGCCACTAACGTCGGGAGCTAGCAACCGTATAATTCCGGTTCTGAAAGCGTTTAGAGGCTCGCTTATCTTTGTCTACACTTTCTTTCTGTCGTTTCTTTTGTTCGTGCGACGGAACAGGGTGGCGGTGCCGGGTTCGCCGAAGAAGAATTTGAAGAAACGGTGGTTGGTTAGAGAGGAAGAGGATACGTTTAGGAGAAGAGCGTTGGCGCAGGATGTTGGAATGGGTCGTGACGACGGTTGTTGCCGGTGGAATACTTCGATTTTTTATGGTGTTAGGAATAACGGTTTGTTTTGTCGTTCTTGGTTTCCGGTTTTTGGTGATCTTAAGGGAATTATGATCATCATTCACGGGCTCAATGAACACAGTGGAAGATATGCAGATTTTGCTAGACAGTTAACATTGTGCAACTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGTAGTGATGGATTGCACGGCTATGTTCCGTCTCTTGATCACGTGGTTGCAGACACAGGAGCTTTCTTGGAAAGTATTAAAGCTGAGAATCCTGGGATACCGTGCTTTCTCTTTGGTCACTCCACTGGAGGTGCTGTGGTGTTGAAAGCGGCGTCACACCCTCAAATTGAAGCGATGGTGGAAGGAGTTATATTAACCTCACCAGCGCTGCGTGTGAAGCCTTCTCACCCAATAGTTGGTGCTGTTGCTCCAATCTTTTCTCTGGTCGCTCCAAGGTTCCAATTCAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCACGGGATCCAGCAGCCTTAGTAGCGAAGTACTCGGATCCTCTAGTCTACACAGGACCTATTAGAGTCCGAACTGGTCACGAAATACTGCGAATATCGTCATACTTAATGCGAAACTTCAAGTCCGTAACAGTACCATTCTTTGTCCTGCATGGAACTGCAGATAAAGTAACTGATCCATTGGCATCACAAGACTTGTACAACAAGGCAGCTTCTGAGTTCAAAGACATAAAGCTTTATGATGGCTTCTTGCATGACCTCTTGTTTGAGCCTGAACGTGAAGAGATAGCTCAGGACATTATCAACTGGATGGAAAAGAGATTGTTTAACAATATTTGA 1125 0.456 MSSIESQMEPLTSGASNRIIPVLKAFRGSLIFVYTFFLSFLLFVRRNRVAVPGSPKKNLKKRWLVREEEDTFRRRALAQDVGMGRDDGCCRWNTSIFYGVRNNGLFCRSWFPVFGDLKGIMIIIHGLNEHSGRYADFARQLTLCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLESIKAENPGIPCFLFGHSTGGAVVLKAASHPQIEAMVEGVILTSPALRVKPSHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALVAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKRLFNNI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00235 374 Gene3D alpha/beta hydrolase 93 371 IPR029058 -
Vivi3g00235 374 Pfam Serine aminopeptidase, S33 117 354 IPR022742 -
Vivi3g00235 374 FunFam Monoglyceride lipase 91 370 - -
Vivi3g00235 374 PANTHER PHOSPHOLIPASE-RELATED 101 369 - -
Vivi3g00235 374 SUPERFAMILY alpha/beta-Hydrolases 105 370 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00235 Vivi-Chr3 4345170 4348360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00235 1 290 Acyl Lipid Metabolism Gene Families AT5G11650 65.232 2.69e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00235 - - gmx:100816265 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00235 3 4345170 4348360 Vivi3g00235 3 4345170 4348360 ECH