Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00201 ATGTTTTCCAAAACTGAACAGCAACACCAAAAGAAAAAGGGAGAATGGTTATCAGGAAGTTTCAAACCAGAGAATTTCATTCCAGGTCTTGTTATAGGTTTTATCTGTGGCTTGTTGATTGATTTAACTAAGCAAACTAGAAATCACTTGTCCAACAAAATTTTCTCGTCTAACAAGGCTCAGCACCAACTCTCACTCTCAAGTAATGGTGATCAAGAACTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAGATCCGGAAAGATTGCGTCTCAATGTGCTCATGCTGCCACTGGCATGTATGCTGAATTAACGCAAAGCAACCGGTCTCTTTTAAGACATTGGGAACACTGCGGTCAGCCCAAAATTGTCGTGACTTGCAAGAACCAACAAGAAATGAATAAGATAAAGGAAACAGCTGAGAGTGTTGGCCTCCCTACTTTTGTTGTTGCCGATGCTGGACGAACACAGGTTTCGGCAGGATCAAAGACTGTACTTGCTGTTGGACCTGGGCCTAAATCAATTGTGGACTCGGTGACTGGAAGGTTGGCTCTACTATGA 567 0.4233 MFSKTEQQHQKKKGEWLSGSFKPENFIPGLVIGFICGLLIDLTKQTRNHLSNKIFSSNKAQHQLSLSSNGDQELKMVLVVRQDLKMRSGKIASQCAHAATGMYAELTQSNRSLLRHWEHCGQPKIVVTCKNQQEMNKIKETAESVGLPTFVVADAGRTQVSAGSKTVLAVGPGPKSIVDSVTGRLALL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00201 188 CDD PTH2 75 188 IPR002833 GO:0004045
Vivi3g00201 188 Pfam Peptidyl-tRNA hydrolase PTH2 74 188 IPR002833 GO:0004045
Vivi3g00201 188 PANTHER PEPTIDYL-TRNA HYDROLASE 2 5 188 IPR002833 GO:0004045
Vivi3g00201 188 Gene3D Bit1 69 188 IPR023476 -
Vivi3g00201 188 NCBIfam aminoacyl-tRNA hydrolase 74 188 IPR002833 GO:0004045
Vivi3g00201 188 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 72 188 - -
Vivi3g00201 188 SUPERFAMILY Peptidyl-tRNA hydrolase II 73 188 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00201 Vivi-Chr3 3835141 3837268 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00201 K04794 - gmx:100527852 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00201 3 3835141 3837268 Vivi3g00201 3 3835141 3837268 ECH