Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00173 ATGTTAGATTTAGCAGTTACAAAAAAAAAAATGGATCTAGGATTTCTTAGATTTCTATGTCAAAGAGAAACAAGGAGATTAGTTTCATTGTTAGGAGTAACAATAGCTTTACTTTTTGTACTTCAATTTTCTGAACTTCCAAATAGTGAGTTTTTTTCTTCTCTTACTGCCAAAATCAAAAGTTTCACAATGGATACACCTATGGTTAATTCTAGCTCAATTAGTCCTCAATCATCTTCATTAGATCAAGTTGCAAGTTTAGAAAAGGGTAAAGGAGTTGAAACTGTTGTTGTTTTTAGAAATGATAGTTCATCAATGAGTAGTGTTGATGGAAAAGATGTTAATTTAACATCACAAGGGAATCAATCTTCCTTGCTTGCACCGCAACCTATGGTGCCTTCGCCCAATACATCATTTTTTGATTCAAAAGCGTATCCAAAGGATGGAATTTTGAGTTCTTTGCAACGTAGCAATGCGACGACGGTTAAAGATGCGTCTGCGATTTGGAAGAATTCCAAAAGGAGGCCTTCTAAAGTAGTTTCAATATCTGAGATGAACTTAATATTGCAGCATAACCATGATTCTTTGCATTCGCAGGGAGTGAAGCCCGCGAGTTCTTCAGCTGTTAATGCGGAGATATTGAATGCAAAATCGGAGATTGAAAATGCGCCTATTGTTATGAATGATTCGAGACTTTACTCACCTTTATACAGGAATGTTTCCATGTTTAGAAGGAGTTACGAACTAATGGAGAAGATGTTGAAAGTATTCATCTACCCGGACGGAGACAAGCCAATCTTCCACGAACCGTTACTGGAAGGAATATATGCATCAGAAGGATGGTTTATGAAATCAATGGAAGGAAACAAACAGTTTACAACTCAAGATCCTGACAAGGCTCACTTGTTTTACATACCTTTCAGTTCGAGATTGTTGCAGTTAACTCTTTATGTACGTAATTCGCACAAACGTTCAAACTTAATCGAGTACATGAAAAACTATGTCGATATGATTGCTGGAAAGTATCCTTTCTGGAATAGAACTAATGGAACAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACACGAGGGCGAATGCTTAATTGCATCAGAGCACTTTGCAATGCTGACACCGAAGTAGGATTCAAGATCGGAAAAGATGTATCTCTTCCCGAAACTTACGTTAGATCGGATGAGAATCCTCTAAAAAACATAGGCGGCAACCCTCCTTCTCAACGGCCCATCCTAGCCTTCTTCGCAGGCGGCTTACACGGTTACGTTCGGCCTATGCTATTGAAGCTTTGGGAGAACAAAGAACCCGACATGAAAATTTCCGGCCCGTTACCACACGTCAGAGGTAACAAAAACTACATCGAGCTCATGAAGAGTAGCAGATTCTGCATATGCGCACGAGGTCACGAAGTTAATAGTCCTCGCGTGGTCGAGGCGATATTCCACGAGTGTGTTCCTGTTATCATATCGGATAATTTTATTCCTCCGTTATTCGAGGTTTTGAATTGGGAGTCTTTTGCTGTGTTCATCAAGGAGAAACATATTGCTTATTTGAGGGATGTACTGGTTTCGATCTCGGAAGAACGATACTTGGAAATGCATAAGAGGGTGAAAATGGTGCAGGAACATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGAGTTTTCTATACAAGTTAG 1743 0.3919 MLDLAVTKKKMDLGFLRFLCQRETRRLVSLLGVTIALLFVLQFSELPNSEFFSSLTAKIKSFTMDTPMVNSSSISPQSSSLDQVASLEKGKGVETVVVFRNDSSSMSSVDGKDVNLTSQGNQSSLLAPQPMVPSPNTSFFDSKAYPKDGILSSLQRSNATTVKDASAIWKNSKRRPSKVVSISEMNLILQHNHDSLHSQGVKPASSSAVNAEILNAKSEIENAPIVMNDSRLYSPLYRNVSMFRRSYELMEKMLKVFIYPDGDKPIFHEPLLEGIYASEGWFMKSMEGNKQFTTQDPDKAHLFYIPFSSRLLQLTLYVRNSHKRSNLIEYMKNYVDMIAGKYPFWNRTNGTDHFVVACHDWAPAETRGRMLNCIRALCNADTEVGFKIGKDVSLPETYVRSDENPLKNIGGNPPSQRPILAFFAGGLHGYVRPMLLKLWENKEPDMKISGPLPHVRGNKNYIELMKSSRFCICARGHEVNSPRVVEAIFHECVPVIISDNFIPPLFEVLNWESFAVFIKEKHIAYLRDVLVSISEERYLEMHKRVKMVQEHFLWHHEPVKYDLFHMLLHSIWYNRVFYTS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00173 580 Pfam Exostosin family 251 530 IPR040911 -
Vivi3g00173 580 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 38 571 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00173 Vivi-Chr3 3184707 3187328 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00173 - - psat:127085356 1021.54