Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00172 ATGTTAGATTTAGCAGTTACAAAAAAAAAAATGGATCTAGGATTTCTTAGATTTCTATGTCAAAGAGAAACAAGGAGATTAGTTTCATTGTTAGGAGTAACAATAGCTTTACTTTTTGTACTTCAATTTTCTGAACTTCCAAATAGTGAGTTTTTTTCTTCTCTTACTGCCAAAATCAAAAGTTTCACAATGGATACACCTATGGTTAATTCTAGCTCAATTAGTCCTCAATCATCTTCATTAGATCAAGTTGCAAGTTTAGAAAAGGGTAAAGGAGTTGAAACTGTTGTTGTTTTTAGAAATGATAGTTCATCAATGAGTAGTGTTGATGGAAAAGATGTTAATTTAACATCACAAGGGAATCAATCTTCCTTGCTTGCACCGCAACCTATGGTGCCTTCGCCCAATACATCATTTTTTGATTCAAAAGCGTATCCAAAGGATGGAATTTTGAGTTCTTTGCAACGTAGCAATGCGACGACGGTTAAAGATGCGTCTGCGATTTGGAAGAATTCCAAAAGGAGGCCTTCTAAAGTAGTTTCAATATCTGAGATGAACTTAATATTGCAGCATAACCATGATTCTTTGCATTCGCAGGGAGTGCCCGCGAGTTCTTCAGCTGTTAATGCGGAGATATTGAATGCAAAATCGGAGATTGAAAATGCGCCTATTGTTATGAATGATTCGAGACTTTACTCACCTTTATACAGGAATGTTTCCATGTTTAGAAGGAGTTACGAACTAATGGAGAAGATGTTGAAAGTATTCATCTACCCGGACGGAGACAAGCCAATCTTCCACGAACCGTTACTGGAAGGAATATATGCATCAGAAGGATGGTTTATGAAATCAATGGAAGGAAACAAACAGTTTACAACTCAAGATCCTGACAAGGCTCACTTGTTTTACATACCTTTCAGTTCGAGATTGTTGCAGTTAACTCTTTATGTACGTAATTCGCACAAACGTTCAAACTTAATCGAGTACATGAAAAACTATGTCGATATGATTGCTGGAAAGTATCCTTTCTGGAATAGAACTAATGGAACAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACACGAGGGCGAATGCTTAATTGCATCAGAGCACTTTGCAATGCTGACACCGAAGTAGGATTCAAGATCGGAAAAGATGTATCTCTTCCCGAAACTTACGTTAGATCGGATGAGAATCCTCTAAAAAACATAGGCGGCAACCCTCCTTCTCAACGGCCCATCCTAGCCTTCTTCGCAGGCGGCTTACACGGTTACGTTCGGCCTATGCTATTGAAGCTTTGGGAGAACAAAGAACCCGACATGAAAATTTCCGGCCCGTTACCACACGTCAGAGGTAACAAAAACTACATCGAGCTCATGAAGAGTAGCAGATTCTGCATATGCGCACGAGGTCACGAAGTTAATAGTCCTCGCGTGGTCGAGGCGATATTCCACGAGTGTGTTCCTGTTATCATATCGGATAATTTTATTCCTCCGTTATTCGAGGTTTTGAATTGGGAGTCTTTTGCTGTGTTCATCAAGGAGAAACATATTGCTTATTTGAGGGATGTACTGGTTTCGATCTCGGAAGAACGATACTTGGAAATGCATAAGAGGGTGAAAATGGTGCAGGAACATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGAGTTTTCTATACAAGTTAG 1740 0.392 MLDLAVTKKKMDLGFLRFLCQRETRRLVSLLGVTIALLFVLQFSELPNSEFFSSLTAKIKSFTMDTPMVNSSSISPQSSSLDQVASLEKGKGVETVVVFRNDSSSMSSVDGKDVNLTSQGNQSSLLAPQPMVPSPNTSFFDSKAYPKDGILSSLQRSNATTVKDASAIWKNSKRRPSKVVSISEMNLILQHNHDSLHSQGVPASSSAVNAEILNAKSEIENAPIVMNDSRLYSPLYRNVSMFRRSYELMEKMLKVFIYPDGDKPIFHEPLLEGIYASEGWFMKSMEGNKQFTTQDPDKAHLFYIPFSSRLLQLTLYVRNSHKRSNLIEYMKNYVDMIAGKYPFWNRTNGTDHFVVACHDWAPAETRGRMLNCIRALCNADTEVGFKIGKDVSLPETYVRSDENPLKNIGGNPPSQRPILAFFAGGLHGYVRPMLLKLWENKEPDMKISGPLPHVRGNKNYIELMKSSRFCICARGHEVNSPRVVEAIFHECVPVIISDNFIPPLFEVLNWESFAVFIKEKHIAYLRDVLVSISEERYLEMHKRVKMVQEHFLWHHEPVKYDLFHMLLHSIWYNRVFYTS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00172 579 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 38 570 IPR004263 GO:0006486|GO:0016757
Vivi3g00172 579 Pfam Exostosin family 250 529 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00172 Vivi-Chr3 3184706 3187328 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00172 - - psat:127085356 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00172 3 3184706 3187328 Vivi3g00172 3 3184706 3187328 ECH