Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00168 ATGGTTATGGCTATTTCATATAGTAATAATAATGCATTTATAGTAAGTTGTTCCATTCAGAAAAGACCTTCTTATGTGTCTGAAAATTCTCATCACCTTAACAATGTTCCACTCTTGTCTAACATGAGATCAACTCTACCTCAAGTTTCCTTGCAAATTGATGTTCTCAGAAGTATGAAAAATGGTGTAGGAAAGTTAGTTGATGTGTTTGTTGATTCATTCTTTGAATTCATTGACAAACCATTGCTTCAGAGTAACTTTGCTCCTGTGGAAGAGTTAGGGGAAGCTATGCTTGTGAATTGCATTCAAGGACGTATTCCGAGTGATTTTCCAGATGGCGTCTACATTAGAAACGGACCAAATCCACTTTTTGGAGGATTGAAATCAACAAATTCTATCTTTGGTAGGTCAAGTCACATTTGGGTGGAAGGAGAAGGAATGCTTCATGCATTGTGTTTTCAAAAATCAAGTCATGGAACCTGGAAAATCATCTACAACAACAAACACGTCGAAACCGAAACTTACAACCTTGAAAAACGTAGAAACAAACCATTGTTTCTTCCTGCCATCGAAGGCAATTCAATCGCCGTTTTGTCTGCTTATCTCTTCAACTGGTTGAGATCAGGAAAAGCAAACAAACACATTAGCAACACCAATGTGTTTGAGCATTCAGGGAAGTTTTACTCGGTTGCTGAAAGTCACATGCCACAAGAGATTGATATTTTTTCCTTGAAAACTTTAAACAATTGGGAACTCAGCGCAGCTTGGAACCGACCTTTTACGAGTCATCCAAAGAAAGCTCCAATTACAGGAGAGCTAGTAACATTAGGTGTGGAACCAATTAAACCTTTCGCCGTGGTTGGAGTTATTTCAGCTGATGGAAAGAAGTTGGTTCATAAAGTTGATATCAAACTAAACAGATGCAGTCTTTGCCATGACATAGGAGTTACACAAAGGTACAATGTGATCATGGATTTTCCACTAACCATTGACCTTATCAGACTTCTTAGAGGAGGCCAGTTAATAAAGTATGATAAGAAAGAATATGCAAGGATTGGAATAATGCCTCGCTATGGTAATGCGGACTCAATTAAATGGTTTGAAGTGGAACCTAATTGCACCTTTCATATTATCAATTCTTTTGAAGATGGAGATGAGGTTGTAGTGAGGGGATGCAGATCTCTTGATTCTATAATTCCTGAACCTGACCCGAGTTCGAGCGAATTTGATTGGTTATCTCGTTGTTACGAATGGCGATTGAATATGAAAACCGGAGAGGTTAAGGAGAAAGATCTCTGTGGTGAAAAATTAGTTTACATGGATTTTCCTATGATCAATGAAAACTTTGTTGGCATTAAGCATAAATATGCTTACACACAAGTAGTTGATCCCACTGCAAACTCCACTACTCAAGATGTGCCAAAATATGGAGGTTTAGCTAAGCTATACTTAGAAGAATCAAGTGAAGAGTTTTCTATGTCAATGGTAAAAGATGAAGGTATAAAGATGGAATACCATATGTTTGAGAAGAATACATATTGCAATGGGGCAGCCTTTGTGGCTAGAGATGGAGGAGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCACAATGAAGATACTAATAAATCTCAAGTTCATATAATAGATACAAAGAATTTCTGTGGTGAGACAGTTGCCAAAATTGAAATGCCTTGTAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAATTTCATTCCAAGATTAG 1755 0.3738 MVMAISYSNNNAFIVSCSIQKRPSYVSENSHHLNNVPLLSNMRSTLPQVSLQIDVLRSMKNGVGKLVDVFVDSFFEFIDKPLLQSNFAPVEELGEAMLVNCIQGRIPSDFPDGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALCFQKSSHGTWKIIYNNKHVETETYNLEKRRNKPLFLPAIEGNSIAVLSAYLFNWLRSGKANKHISNTNVFEHSGKFYSVAESHMPQEIDIFSLKTLNNWELSAAWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGVISADGKKLVHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLIRLLRGGQLIKYDKKEYARIGIMPRYGNADSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSIIPEPDPSSSEFDWLSRCYEWRLNMKTGEVKEKDLCGEKLVYMDFPMINENFVGIKHKYAYTQVVDPTANSTTQDVPKYGGLAKLYLEESSEEFSMSMVKDEGIKMEYHMFEKNTYCNGAAFVARDGGVEEDDGWIITFVHNEDTNKSQVHIIDTKNFCGETVAKIEMPCRVPYGFHGAFMPISFQD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00168 584 PANTHER BETA-CAROTENE DIOXYGENASE 84 578 IPR004294 GO:0016702
Vivi3g00168 584 Pfam Retinal pigment epithelial membrane protein 88 579 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00168 Vivi-Chr3 3136837 3139561 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00168 - - gmx:100817738 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00168 3 3136837 3139561 Vivi3g00168 3 3136837 3139561 ECH