Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00158 ATGAACTTCAACACTTCTGTCTCTAAATGCTCAGTCCATCAGTTGGAGACATTAGATGAGAATGTTCCTGCCTCATCATCTGGCCTTCCGCCGCCTGAAACGCCGACAGAATCTATGGAGTTTCTTGCTAGATCATGGAGTCTTTCTGCTACAGAACTATCCAAAGCATTGCATAGCACCAATACCACGACATCCTCGGCTATTGAGATGCAACTTCTATGCCATTCTGATCAGTTTAATACCAAAGGCTTCACTGCTTCTAAGGATTCTTTATCTATCGGGCGTTATTCTCAGATTTCGCCTAAAGAAAGTAGCGAAACGAAGGATTTACTTTTACTTCATCAAGCACTTTCTACGGATTTCATTTCGAGTCAAAACTTGCTGAGAAATGGGCTCTATAGGAGCTTGATGAGAGGGAAGACAACAGGTAGGTGGTTGAAAGATCAGAAGGAGAGGAAAAAGCAAGAAATTCGGACTCACAATGCTCAGCTTCACGCCGCAGTATCGGTAGTTGGTGTTGCCGCCGCTGTTGCAGCAGTTGCGGCTTCAATAGCATCGTCCGATAAACCTAACGCCATGGCTTCTGCTGCAGTTGCTTCTGCAGCTTCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGACCAGATCGTAACCGCAGTCGACTCGGCTATTAACGCAAAAACCAATGGGGATATTATGACTCTTACAGCTGGAGCAGCCACGGCTTTGCGAGGAGCTGCTACGCTAAAGGCGCGTCTGGAGAAGGGGATTGGAGCTACTGCGATTCCTCCGATTGAGGAGAAGTGCGGCGAAGCCAAAGAAGCAAGCATCTTGGCAGCACTGGACTTTGTCTTTAGAGGAGGCGTACTTCTCAAACGTACAAGAAAAGGAATTCTTCACTGGAAGCAAGTTTCTTTCAATATAAATTCAAATTTTCAGGTAGTAGCGAAAATGAAAAGCAAGCATATTGCAGGAACATTCACGAAAAAGAAGAAATATATAGTCACTGGAGTTTGCAGTGATATCCCAGCTTGGCCCGGAAGGGAAGACCATTGCGAAAAGAGAGCGTATTTTGGAATAAAAACAGCCGACAGATTAATAGAATTTGAATGTGGAAGAAAAGGAGACAAGCTGTTCTGGTTAGAAGGAATCCAATACATGTTGAATTGCCGCGCCAAAGTAACATACTGA 1212 0.4472 MNFNTSVSKCSVHQLETLDENVPASSSGLPPPETPTESMEFLARSWSLSATELSKALHSTNTTTSSAIEMQLLCHSDQFNTKGFTASKDSLSIGRYSQISPKESSETKDLLLLHQALSTDFISSQNLLRNGLYRSLMRGKTTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAVAASIASSDKPNAMASAAVASAASLVASHCIEIAEDMGAEQDQIVTAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLEKGIGATAIPPIEEKCGEAKEASILAALDFVFRGGVLLKRTRKGILHWKQVSFNINSNFQVVAKMKSKHIAGTFTKKKKYIVTGVCSDIPAWPGREDHCEKRAYFGIKTADRLIEFECGRKGDKLFWLEGIQYMLNCRAKVTY 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00158 403 Pfam Auxin canalisation 32 274 IPR008546 -
Vivi3g00158 403 MobiDBLite consensus disorder prediction 19 38 - -
Vivi3g00158 403 Pfam Plant pleckstrin homology-like region 297 398 IPR013666 -
Vivi3g00158 403 PANTHER EXPRESSED PROTEIN 27 399 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00158 Vivi-Chr3 3040486 3042809 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00158 - - psat:127084614 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00158 3 3040486 3042809 Vivi3g00158 3 3040486 3042809 ECH